Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   NGO_RS00635 Genome accession   NC_002946
Coordinates   137469..137750 (+) Length   93 a.a.
NCBI ID   WP_003696701.1    Uniprot ID   A0A0H4IVZ5
Organism   Neisseria gonorrhoeae FA 1090     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 132469..142750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NGO_RS00600 (NGO0121) - 132575..133729 (+) 1155 WP_003694771.1 cupin domain-containing protein -
  NGO_RS00605 (NGO_00655) - 133738..133965 (+) 228 WP_025456393.1 hypothetical protein -
  NGO_RS00610 (NGO0122) - 133958..134311 (+) 354 WP_003704890.1 hypothetical protein -
  NGO_RS00615 (NGO0123) - 134372..135646 (+) 1275 WP_003696697.1 HlyD family secretion protein -
  NGO_RS00620 (NGO0124) - 135831..136178 (+) 348 WP_003687399.1 hypothetical protein -
  NGO_RS00625 (NGO0125) - 136192..136407 (+) 216 WP_003687400.1 hypothetical protein -
  NGO_RS00630 (NGO0125a) - 136509..137060 (+) 552 Protein_124 cysteine peptidase family C39 domain-containing protein -
  NGO_RS11550 - 137046..137276 (+) 231 WP_225577515.1 ATP-binding cassette domain-containing protein -
  NGO_RS11220 - 137274..137390 (-) 117 Protein_126 IS5/IS1182 family transposase -
  NGO_RS00635 (NGO_00685) comA 137469..137750 (+) 282 WP_003696701.1 ATP-binding cassette domain-containing protein Regulator
  NGO_RS00640 (NGO0127) - 137771..138997 (-) 1227 WP_003690589.1 YihY family inner membrane protein -
  NGO_RS12145 - 139096..139300 (+) 205 Protein_129 NAD(P)H-quinone oxidoreductase -
  NGO_RS00650 (NGO0129) queC 139485..140159 (+) 675 WP_010950996.1 7-cyano-7-deazaguanine synthase QueC -
  NGO_RS00655 (NGO0130) - 140187..140702 (+) 516 WP_003687408.1 DUF1543 domain-containing protein -
  NGO_RS00660 (NGO0131) queD 140790..141212 (+) 423 WP_003704886.1 6-carboxytetrahydropterin synthase QueD -
  NGO_RS12150 (NGO_00715) - 141478..141850 (+) 373 Protein_133 DUF1304 domain-containing protein -
  NGO_RS00670 (NGO0132) - 141847..142485 (+) 639 WP_025456391.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10117.78 Da        Isoelectric Point: 6.4598

>NTDB_id=21828 NGO_RS00635 WP_003696701.1 137469..137750(+) (comA) [Neisseria gonorrhoeae FA 1090]
MIREEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDEAASHLDIANEKAVNANLNGLSIIKIMAAHRK
ETVESADRKMSLG

Nucleotide


Download         Length: 282 bp        

>NTDB_id=21828 NGO_RS00635 WP_003696701.1 137469..137750(+) (comA) [Neisseria gonorrhoeae FA 1090]
ATGATTCGCGAAGAAATCTCCGCCATGCCTATGGGCTATGAAACCTTGATCGGCGATATGGGCAGCGCACTGTCAGGCGG
ACAAAAACAACGTATCGTATTGGCGCGGGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGAAGCGGCCAGTCATT
TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATTATAAAAATTATGGCGGCACACAGAAAG
GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(14-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H4IVZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

46.154

97.849

0.452
  comA Streptococcus mitis NCTC 12261

45.055

97.849

0.441
  comA Streptococcus pneumoniae TIGR4

45.055

97.849

0.441
  comA Streptococcus pneumoniae Rx1

45.055

97.849

0.441
  comA Streptococcus pneumoniae R6

45.055

97.849

0.441
  comA Streptococcus pneumoniae D39

45.055

97.849

0.441
  comA/nlmT Streptococcus mutans UA159

47.126

93.548

0.441
  comA Streptococcus gordonii str. Challis substr. CH1

43.956

97.849

0.43

Multiple sequence alignment