Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   BZ167_RS17525 Genome accession   NZ_CP019626
Coordinates   3543482..3543859 (+) Length   125 a.a.
NCBI ID   WP_015417814.1    Uniprot ID   -
Organism   Bacillus sp. 275     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3538482..3548859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZ167_RS17490 (BZ167_17565) - 3538797..3539747 (+) 951 WP_015417820.1 magnesium transporter CorA family protein -
  BZ167_RS17495 (BZ167_17570) comGA 3539940..3541010 (+) 1071 WP_003153083.1 competence type IV pilus ATPase ComGA Machinery gene
  BZ167_RS17500 (BZ167_17575) comGB 3540997..3542034 (+) 1038 WP_015417819.1 competence type IV pilus assembly protein ComGB Machinery gene
  BZ167_RS17505 (BZ167_17580) comGC 3542081..3542347 (+) 267 WP_050515801.1 competence type IV pilus major pilin ComGC Machinery gene
  BZ167_RS17510 (BZ167_17585) comGD 3542337..3542774 (+) 438 WP_015417817.1 competence type IV pilus minor pilin ComGD Machinery gene
  BZ167_RS17515 (BZ167_17590) comGE 3542758..3543072 (+) 315 WP_031378943.1 competence type IV pilus minor pilin ComGE -
  BZ167_RS17520 (BZ167_17595) comGF 3542981..3543481 (+) 501 WP_258548905.1 competence type IV pilus minor pilin ComGF -
  BZ167_RS17525 (BZ167_17600) comGG 3543482..3543859 (+) 378 WP_015417814.1 competence type IV pilus minor pilin ComGG Machinery gene
  BZ167_RS17530 (BZ167_17605) - 3543916..3544095 (+) 180 WP_003153093.1 YqzE family protein -
  BZ167_RS17535 (BZ167_17610) - 3544135..3544464 (-) 330 WP_012117979.1 DUF3889 domain-containing protein -
  BZ167_RS17540 (BZ167_17615) tapA 3544723..3545394 (+) 672 WP_015417813.1 amyloid fiber anchoring/assembly protein TapA -
  BZ167_RS17545 (BZ167_17620) - 3545366..3545950 (+) 585 WP_015240205.1 signal peptidase I -
  BZ167_RS17550 (BZ167_17625) - 3546015..3546800 (+) 786 WP_007408329.1 TasA family protein -
  BZ167_RS17555 (BZ167_17630) sinR 3546848..3547183 (-) 336 WP_003153104.1 transcriptional regulator SinR Regulator
  BZ167_RS17560 (BZ167_17635) sinI 3547217..3547390 (-) 174 WP_003153105.1 anti-repressor SinI family protein Regulator
  BZ167_RS17565 (BZ167_17640) - 3547567..3548361 (-) 795 WP_007408330.1 YqhG family protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14167.09 Da        Isoelectric Point: 9.7165

>NTDB_id=217387 BZ167_RS17525 WP_015417814.1 3543482..3543859(+) (comGG) [Bacillus sp. 275]
MYKSDGFIYPAVLFVSAAVLLVISYTSSDFITRKTFAKEAGEYWIGENLLQNGALLSSRHMTQGQKVQTGTQRFPYGTVS
FHITGSDRRETVQVTIQAETTTGTRREAHLLFDQKKKQLIQWTEV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=217387 BZ167_RS17525 WP_015417814.1 3543482..3543859(+) (comGG) [Bacillus sp. 275]
ATGTACAAATCTGACGGTTTTATATATCCCGCGGTTCTGTTTGTTTCTGCCGCAGTTTTACTTGTCATCAGCTATACTTC
ATCTGATTTCATCACCCGAAAAACATTTGCAAAAGAGGCAGGGGAGTACTGGATCGGAGAGAACCTGCTCCAAAACGGCG
CGCTGCTGTCAAGCCGCCATATGACACAGGGACAAAAGGTCCAAACTGGTACACAGCGTTTTCCGTATGGCACCGTTTCT
TTTCACATCACGGGGAGTGATCGCCGGGAAACGGTTCAGGTTACAATTCAGGCGGAAACCACGACAGGTACGAGACGGGA
GGCTCACCTTTTGTTCGATCAGAAGAAGAAACAGCTGATTCAATGGACGGAAGTATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

50.806

99.2

0.504

Multiple sequence alignment