Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BZ167_RS17555 | Genome accession | NZ_CP019626 |
| Coordinates | 3546848..3547183 (-) | Length | 111 a.a. |
| NCBI ID | WP_003153104.1 | Uniprot ID | - |
| Organism | Bacillus sp. 275 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3541848..3552183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZ167_RS17505 (BZ167_17580) | comGC | 3542081..3542347 (+) | 267 | WP_050515801.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BZ167_RS17510 (BZ167_17585) | comGD | 3542337..3542774 (+) | 438 | WP_015417817.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BZ167_RS17515 (BZ167_17590) | comGE | 3542758..3543072 (+) | 315 | WP_031378943.1 | competence type IV pilus minor pilin ComGE | - |
| BZ167_RS17520 (BZ167_17595) | comGF | 3542981..3543481 (+) | 501 | WP_258548905.1 | competence type IV pilus minor pilin ComGF | - |
| BZ167_RS17525 (BZ167_17600) | comGG | 3543482..3543859 (+) | 378 | WP_015417814.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BZ167_RS17530 (BZ167_17605) | - | 3543916..3544095 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| BZ167_RS17535 (BZ167_17610) | - | 3544135..3544464 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| BZ167_RS17540 (BZ167_17615) | tapA | 3544723..3545394 (+) | 672 | WP_015417813.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BZ167_RS17545 (BZ167_17620) | - | 3545366..3545950 (+) | 585 | WP_015240205.1 | signal peptidase I | - |
| BZ167_RS17550 (BZ167_17625) | - | 3546015..3546800 (+) | 786 | WP_007408329.1 | TasA family protein | - |
| BZ167_RS17555 (BZ167_17630) | sinR | 3546848..3547183 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
| BZ167_RS17560 (BZ167_17635) | sinI | 3547217..3547390 (-) | 174 | WP_003153105.1 | anti-repressor SinI family protein | Regulator |
| BZ167_RS17565 (BZ167_17640) | - | 3547567..3548361 (-) | 795 | WP_007408330.1 | YqhG family protein | - |
| BZ167_RS17570 (BZ167_17645) | - | 3548383..3550053 (-) | 1671 | WP_015417810.1 | SNF2-related protein | - |
| BZ167_RS17575 (BZ167_17650) | gcvT | 3550477..3551577 (+) | 1101 | WP_031378949.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12972.64 Da Isoelectric Point: 7.2023
>NTDB_id=217388 BZ167_RS17555 WP_003153104.1 3546848..3547183(-) (sinR) [Bacillus sp. 275]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKAQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKAQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=217388 BZ167_RS17555 WP_003153104.1 3546848..3547183(-) (sinR) [Bacillus sp. 275]
TTGATTGGCCAGCGTATTAAACAATACCGAAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATTTACAGACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTACTTGATGAAAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTAGTTCGCGATGCGATGACATCCGGGGTATCAAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAAGC
GCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGAAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATTTACAGACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTACTTGATGAAAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTAGTTCGCGATGCGATGACATCCGGGGTATCAAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAAGC
GCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
99.099 |
100 |
0.991 |