Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | BZ167_RS17505 | Genome accession | NZ_CP019626 |
| Coordinates | 3542081..3542347 (+) | Length | 88 a.a. |
| NCBI ID | WP_050515801.1 | Uniprot ID | - |
| Organism | Bacillus sp. 275 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3537081..3547347
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZ167_RS17485 (BZ167_17560) | - | 3537350..3538651 (-) | 1302 | WP_012117986.1 | hemolysin family protein | - |
| BZ167_RS17490 (BZ167_17565) | - | 3538797..3539747 (+) | 951 | WP_015417820.1 | magnesium transporter CorA family protein | - |
| BZ167_RS17495 (BZ167_17570) | comGA | 3539940..3541010 (+) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BZ167_RS17500 (BZ167_17575) | comGB | 3540997..3542034 (+) | 1038 | WP_015417819.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BZ167_RS17505 (BZ167_17580) | comGC | 3542081..3542347 (+) | 267 | WP_050515801.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BZ167_RS17510 (BZ167_17585) | comGD | 3542337..3542774 (+) | 438 | WP_015417817.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BZ167_RS17515 (BZ167_17590) | comGE | 3542758..3543072 (+) | 315 | WP_031378943.1 | competence type IV pilus minor pilin ComGE | - |
| BZ167_RS17520 (BZ167_17595) | comGF | 3542981..3543481 (+) | 501 | WP_258548905.1 | competence type IV pilus minor pilin ComGF | - |
| BZ167_RS17525 (BZ167_17600) | comGG | 3543482..3543859 (+) | 378 | WP_015417814.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BZ167_RS17530 (BZ167_17605) | - | 3543916..3544095 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| BZ167_RS17535 (BZ167_17610) | - | 3544135..3544464 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| BZ167_RS17540 (BZ167_17615) | tapA | 3544723..3545394 (+) | 672 | WP_015417813.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BZ167_RS17545 (BZ167_17620) | - | 3545366..3545950 (+) | 585 | WP_015240205.1 | signal peptidase I | - |
| BZ167_RS17550 (BZ167_17625) | - | 3546015..3546800 (+) | 786 | WP_007408329.1 | TasA family protein | - |
| BZ167_RS17555 (BZ167_17630) | sinR | 3546848..3547183 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9749.37 Da Isoelectric Point: 6.2027
>NTDB_id=217385 BZ167_RS17505 WP_050515801.1 3542081..3542347(+) (comGC) [Bacillus sp. 275]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTVCPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTVCPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=217385 BZ167_RS17505 WP_050515801.1 3542081..3542347(+) (comGC) [Bacillus sp. 275]
ATGCTGATTGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGTCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
ATGCTGATTGTTTTATTTATCGTTTCCATTCTGCTTTTAATCACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAAGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGACCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGTCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACAGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
76.056 |
80.682 |
0.614 |