Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BWR56_RS00010 Genome accession   NZ_CP019562
Coordinates   1579..2337 (-) Length   252 a.a.
NCBI ID   WP_049505012.1    Uniprot ID   A0A1L8Q4D2
Organism   Streptococcus oralis strain S.MIT/ORALIS-351     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1..7337
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWR56_RS00005 (BWR56_0001) dnaA 1..1362 (-) 1362 WP_061421574.1 chromosomal replication initiator protein DnaA -
  BWR56_RS00010 (BWR56_0002) spo0J 1579..2337 (-) 759 WP_049505012.1 ParB/RepB/Spo0J family partition protein Regulator
  BWR56_RS00015 (BWR56_0003) htrA 2395..3591 (-) 1197 WP_049505014.1 S1C family serine protease Regulator
  BWR56_RS00020 (BWR56_0004) rlmH 3777..4256 (+) 480 WP_049505015.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BWR56_RS00030 (BWR56_0006) comC/comC1 4538..4663 (+) 126 WP_008282505.1 competence-stimulating peptide ComC Regulator
  BWR56_RS00035 (BWR56_0007) comD 4684..6003 (+) 1320 WP_049505018.1 competence system sensor histidine kinase ComD Regulator
  BWR56_RS00040 (BWR56_0008) comE 6000..6752 (+) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29058.55 Da        Isoelectric Point: 8.2642

>NTDB_id=216285 BWR56_RS00010 WP_049505012.1 1579..2337(-) (spo0J) [Streptococcus oralis strain S.MIT/ORALIS-351]
MEKFEMISISEIQKNPYQPRKEFDTDKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILVEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKQKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=216285 BWR56_RS00010 WP_049505012.1 1579..2337(-) (spo0J) [Streptococcus oralis strain S.MIT/ORALIS-351]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGAAAAGAATTTGATACAGATAA
ACTAAAGGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCGGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTACTTTCCCTACCAGAATATATCTTAGTTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCTCTAGTTGGTTTAGACAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGAGAAAAAACAAAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAGATAAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(149-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L8Q4D2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512

Multiple sequence alignment