Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   BZG42_RS02935 Genome accession   NZ_CP019557
Coordinates   590727..592076 (+) Length   449 a.a.
NCBI ID   WP_024532081.1    Uniprot ID   A0A2Z5TLH3
Organism   Streptococcus sp. DAT741     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 585727..597076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS02910 (BZG42_02905) - 586843..587502 (-) 660 WP_155995672.1 amino acid ABC transporter permease -
  BZG42_RS02915 (BZG42_02910) - 587515..588213 (-) 699 WP_120171456.1 amino acid ABC transporter permease -
  BZG42_RS02920 (BZG42_02915) - 588228..589064 (-) 837 WP_120171457.1 transporter substrate-binding domain-containing protein -
  BZG42_RS02925 (BZG42_02920) - 589074..589835 (-) 762 WP_155995675.1 amino acid ABC transporter ATP-binding protein -
  BZG42_RS02930 (BZG42_02925) micA 590030..590734 (+) 705 WP_120171458.1 response regulator YycF Regulator
  BZG42_RS02935 (BZG42_02930) micB 590727..592076 (+) 1350 WP_024532081.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BZG42_RS02940 (BZG42_02935) vicX 592083..592886 (+) 804 WP_024532080.1 MBL fold metallo-hydrolase Regulator
  BZG42_RS02945 (BZG42_02940) pbp2b 593110..595185 (+) 2076 WP_024532079.1 penicillin-binding protein PBP2B -
  BZG42_RS02950 (BZG42_02945) recR 595194..595790 (+) 597 WP_024532078.1 recombination mediator RecR -

Sequence


Protein


Download         Length: 449 a.a.        Molecular weight: 51069.15 Da        Isoelectric Point: 4.6687

>NTDB_id=216214 BZG42_RS02935 WP_024532081.1 590727..592076(+) (micB) [Streptococcus sp. DAT741]
MFNQLRYLITTAEFWFVGILIGFLIALTVLLIENYRDNKQIKQLNQKVNALIDGNYADILDLRGSPEITDMANSLNDLSE
VIRLTHDHLEQEKTRLTSILSYMSDGVVATDRIGRVIMINDMAQKQLGLSGKKQEQYHLLEVLDLPDRYTLRDLFAQTPE
IIIEHTNENEEFLTLRANFATIRSESGLISGLVVVLHDMTEQAKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALT
ESVAPSFVKVSLDETNRMIRMITDLLSLSRIDNQVGQVDVELINFTAFVTFILNRFDQMKNADSDKVYTIVRDYQISPIW
VEIDTDKMTQVLDNILNNAIKYSPDGGRITFSMKTTDSQLIVSISDEGLGIPKTDLPKIFDRFYRVDKARSRAQGGTGLG
LAIAKEIIKQHRGFIWAKSEYGHGSTFTIVLPYSKDIALDDWDEASEEE

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=216214 BZG42_RS02935 WP_024532081.1 590727..592076(+) (micB) [Streptococcus sp. DAT741]
ATGTTTAATCAATTACGGTATCTAATTACTACAGCAGAGTTTTGGTTTGTCGGAATTTTGATTGGTTTTCTGATTGCTTT
GACGGTTCTCTTGATTGAAAACTACCGAGATAATAAGCAAATCAAACAACTGAATCAAAAAGTCAATGCTCTCATTGATG
GAAATTATGCAGATATTTTAGATTTGAGAGGGAGTCCAGAAATTACTGATATGGCTAACTCTCTTAATGATTTGTCAGAA
GTTATTCGGCTGACTCATGATCATTTAGAGCAGGAAAAAACACGCTTGACTTCCATTCTTTCCTATATGAGTGATGGGGT
GGTTGCAACGGACAGGATTGGGCGAGTTATCATGATCAACGATATGGCCCAGAAGCAGTTGGGGTTATCGGGAAAAAAGC
AGGAACAGTACCATCTGCTAGAGGTGTTAGATTTACCAGATCGGTATACTCTCAGAGATTTGTTTGCTCAGACACCAGAG
ATTATTATTGAGCACACCAATGAAAATGAGGAATTTCTCACTCTTCGTGCCAATTTTGCTACCATTCGTAGCGAGAGCGG
CTTGATTTCAGGTCTAGTAGTCGTCTTGCACGATATGACCGAACAGGCCAAAGAAGAGCGAGAGCGGCGCTTATTCGTAT
CCAATGTCAGTCATGAATTGCGGACTCCTTTGACTTCTGTTAAGTCCTACTTAGAAGCCTTGGATGAAGGAGCTTTGACT
GAGTCGGTTGCCCCGAGTTTTGTCAAAGTATCCTTGGATGAAACCAATCGAATGATACGGATGATTACAGACTTGTTAAG
TCTCTCCCGAATCGACAATCAAGTTGGTCAGGTAGATGTGGAGCTGATCAATTTTACGGCTTTTGTAACCTTTATCCTCA
ACCGTTTTGACCAGATGAAAAATGCCGACTCTGATAAGGTTTACACCATTGTACGTGATTATCAGATTAGCCCAATTTGG
GTGGAGATTGATACTGATAAGATGACGCAAGTTTTAGATAATATCCTGAACAATGCTATCAAATACTCACCTGATGGTGG
TAGGATTACTTTTAGTATGAAAACGACAGACAGCCAGTTGATTGTGTCTATTTCCGATGAAGGCTTGGGGATTCCAAAGA
CAGACTTACCTAAGATTTTCGACCGTTTTTATCGGGTAGACAAGGCACGCTCAAGGGCACAAGGAGGCACTGGCTTAGGA
CTGGCCATTGCCAAAGAAATCATCAAGCAACACAGGGGCTTTATTTGGGCTAAGAGCGAGTATGGCCATGGTTCAACCTT
TACCATTGTCTTACCATATAGTAAGGACATTGCTCTTGACGATTGGGATGAAGCTTCTGAGGAAGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2Z5TLH3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

69.037

97.105

0.67

  vicK Streptococcus mutans UA159

69.479

89.755

0.624


Multiple sequence alignment