Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BZG42_RS02940 Genome accession   NZ_CP019557
Coordinates   592083..592886 (+) Length   267 a.a.
NCBI ID   WP_024532080.1    Uniprot ID   A0A2Z5TLI9
Organism   Streptococcus sp. DAT741     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 587083..597886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BZG42_RS02915 (BZG42_02910) - 587515..588213 (-) 699 WP_120171456.1 amino acid ABC transporter permease -
  BZG42_RS02920 (BZG42_02915) - 588228..589064 (-) 837 WP_120171457.1 transporter substrate-binding domain-containing protein -
  BZG42_RS02925 (BZG42_02920) - 589074..589835 (-) 762 WP_155995675.1 amino acid ABC transporter ATP-binding protein -
  BZG42_RS02930 (BZG42_02925) micA 590030..590734 (+) 705 WP_120171458.1 response regulator YycF Regulator
  BZG42_RS02935 (BZG42_02930) micB 590727..592076 (+) 1350 WP_024532081.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BZG42_RS02940 (BZG42_02935) vicX 592083..592886 (+) 804 WP_024532080.1 MBL fold metallo-hydrolase Regulator
  BZG42_RS02945 (BZG42_02940) pbp2b 593110..595185 (+) 2076 WP_024532079.1 penicillin-binding protein PBP2B -
  BZG42_RS02950 (BZG42_02945) recR 595194..595790 (+) 597 WP_024532078.1 recombination mediator RecR -
  BZG42_RS02955 (BZG42_02950) - 596044..597090 (+) 1047 WP_155995678.1 D-alanine--D-alanine ligase -
  BZG42_RS02960 (BZG42_02955) - 597552..597848 (+) 297 WP_120171819.1 WXG100 family type VII secretion target -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29621.68 Da        Isoelectric Point: 5.7767

>NTDB_id=216215 BZG42_RS02940 WP_024532080.1 592083..592886(+) (vicX) [Streptococcus sp. DAT741]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLSEIDRRPEEIDAIFVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIEANHDVEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGTDFQVCDTSPDTATALTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=216215 BZG42_RS02940 WP_024532080.1 592083..592886(+) (vicX) [Streptococcus sp. DAT741]
ATGATCGGAAAAGGTTTTAATTACAGTATTTTAGCTTCGGGCTCCAGTGGTAATTGCTTTTATTTGGAAACCGATAAGAA
GAAAATTTTAGTGGATGCAGGTTTGTCTGGTAAAAAAATCACCAGTCTCCTTTCGGAAATTGACCGCAGACCAGAGGAGA
TTGATGCTATTTTTGTGACGCATGAGCATAGTGACCATATCCATGGTATCGGTGTCTTGGCTCGGAAATATGGCATGGAT
ATATACGCTAACGAGTTAACCTGGCAGGCAATGGAAAGTAAGCTTGGTAAGATTGATGTTGCTCAGAAACATATCTTTGA
GTTAGGGGCGATGAAGACATTTGGAGACTTGGACATTGAATCCTTCGGTGTCAGTCACGATGCAGCCTGCCCACAATTTT
ATCGTTTTATGAAGGACGATAAGTCTTTCGTTATGTTGACAGATACAGGTTATGTCAGTGATCGCATGGTTGGAATTGTG
GAAAATGCAGATGCCTATTTGATTGAGGCGAACCATGATGTTGAAATTTTGCGAGCAGGTTCTTATTCTTGGAATTTGAA
GCAACGTATCCTTTCAGATAAGGGGCACCTCTGTAATGAGGATGGAGCAGATGCTATGATTCGCTCGCTAGGAAATCGGA
CAAAAAAGATTTACCTTGGGCATTTGTCTAAGGAGAATAATATTAAAGAACTTGCTCATATGACGATGGTTAATCAGCTT
GCGCAAGCTGACTTGGGAGTAGGAACTGATTTTCAAGTTTGTGATACGTCTCCGGATACAGCAACCGCTTTAACGAAGAT
TTGA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-211)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z5TLI9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

73.783

100

0.738

Multiple sequence alignment