Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   NMA_RS00820 Genome accession   NC_003116
Coordinates   142207..143394 (-) Length   395 a.a.
NCBI ID   WP_002246734.1    Uniprot ID   A0A0U1RGV7
Organism   Neisseria meningitidis Z2491     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 137207..148394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMA_RS00795 (NMA0153) - 137504..137884 (-) 381 WP_002239423.1 helix-turn-helix domain-containing protein -
  NMA_RS00800 (NMA0154) - 138003..138554 (+) 552 WP_002230190.1 hypothetical protein -
  NMA_RS00805 (NMA0155) - 138574..139269 (+) 696 WP_002233407.1 hypothetical protein -
  NMA_RS00810 (NMA0156) topA 139342..141648 (-) 2307 WP_010981052.1 type I DNA topoisomerase -
  NMA_RS00815 (NMA0157) - 141720..142181 (-) 462 WP_002215351.1 DUF494 domain-containing protein -
  NMA_RS00820 (NMA0158) dprA 142207..143394 (-) 1188 WP_002246734.1 DNA-processing protein DprA Machinery gene
  NMA_RS00825 (NMA0159) - 143485..144762 (-) 1278 WP_002246735.1 sigma-54-dependent transcriptional regulator -
  NMA_RS00830 (NMA0160) - 144755..146875 (-) 2121 WP_002245785.1 sensor histidine kinase -
  NMA_RS00835 (NMA0161) - 146875..147474 (-) 600 WP_002216221.1 DUF4390 domain-containing protein -

Sequence


Protein


Download         Length: 395 a.a.        Molecular weight: 42072.25 Da        Isoelectric Point: 6.1732

>NTDB_id=21621 NMA_RS00820 WP_002246734.1 142207..143394(-) (dprA) [Neisseria meningitidis Z2491]
MTEDERFAWLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQVAALIRHKQALEAWRNAEKRALARQAAEAALEWEMRD
GCRLMLLQDEDFPEMLTQGLTAPPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFPRRNRLIAALSQVTLVVEAALES
GSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIKDGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQT
AYAPPPAAKMPSEAAAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPSGRYQRIRT

Nucleotide


Download         Length: 1188 bp        

>NTDB_id=21621 NMA_RS00820 WP_002246734.1 142207..143394(-) (dprA) [Neisseria meningitidis Z2491]
ATGACAGAGGACGAACGTTTCGCGTGGCTGCAATTGGCGTTTACGCCCTATATCGGCGCGGAAAGTTTCCTGCTGCTGAT
GCGCCGTTTCGGCAGCGCGCAAAATGCCCTGTCCGCACCGGCGGAACAGGTGGCGGCACTGATACGGCACAAACAGGCGC
TTGAGGCTTGGCGCAATGCGGAAAAACGCGCTCTGGCGCGGCAGGCGGCAGAAGCGGCGTTGGAATGGGAAATGCGGGAC
GGATGCCGCCTGATGCTGCTTCAGGATGAAGATTTCCCCGAAATGCTGACGCAGGGGCTGACCGCGCCGCCGGTTTTGTT
TTTGCGCGGCAACGTGCGGCTGCTGCACAAGCCTTCCGCCGCCATCGTCGGCAGCCGCCATGCCACGCCGCAGGCGATGC
GGATTGCCAAAGATTTCGGCAAGTCGTTGGGCGGGCAAAATATCCCCGTTGTGTCGGGTATGGCTTCCGGTATCGATACT
GCCGCCCATCAGGGCGCACTGGAGGCAGAAGGCGGCACCATCGCCGTGTGGGGGACGGGTATAGACCGCATTTACCCGCC
GTCCAATAAAAACCTTGCCTATGAAATCGCCGAAAAAGGATTGATTGTCAGCGAGTTTCCCATCGGTACGCGCCCGTATG
CCGGCAATTTTCCGCGCCGCAACCGCCTGATTGCCGCCCTGTCGCAAGTAACGCTGGTGGTTGAAGCCGCCTTGGAATCC
GGTTCGCTGATTACCGCCGGCCTGGCGGCAGAAATGGGGCGCGAAGTGATGGCGGTACCCGGTTCGATAGACAATCCGCA
CAGCAAAGGCTGCCACAAACTGATTAAAGACGGCGCAAAATTGGTGGAATGCCTGGACGACATCCTGAACGAATGCCCGG
GGCTATTGCAAAATACGGGTGCTTCATCATATTCTATAAATAAGGATACGCCCGACACGGGACGCCGCGCCGTTCAGACG
GCATACGCCCCGCCGCCTGCCGCAAAAATGCCGTCTGAAGCGGCGGCAGGCGGCACAGCCGTCGGCGGCATACTGGATAA
AATGGGTTTCGACCCCATCCATCCCGACGTGCTTGCCGGACAGTTGGCTATGCCTGCCGCAGATTTGTATGCCGCACTGT
TGGAATTGGAATTGGACGGCAGCGTTGCCGCAATGCCCAGCGGCAGATACCAGCGTATCCGAACTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U1RGV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria gonorrhoeae MS11

96.203

100

0.962

  dprA Neisseria gonorrhoeae strain FA1090

95.949

100

0.959

  dprA Neisseria meningitidis strain C311

91.688

100

0.922

  dprA Neisseria meningitidis MC58

91.688

100

0.922

  dprA Vibrio cholerae strain A1552

37.531

100

0.377


Multiple sequence alignment