Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BWZ32_RS06540 | Genome accession | NZ_CP019320 |
| Coordinates | 1353987..1354289 (+) | Length | 100 a.a. |
| NCBI ID | WP_013572179.1 | Uniprot ID | A0AAN1PPQ8 |
| Organism | Vibrio vulnificus strain VV2014DJH | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1348987..1359289
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWZ32_RS06525 (BWZ32_06515) | lon | 1349000..1351351 (+) | 2352 | WP_011078147.1 | endopeptidase La | - |
| BWZ32_RS06530 (BWZ32_06520) | - | 1351546..1351818 (+) | 273 | WP_013572181.1 | HU family DNA-binding protein | - |
| BWZ32_RS06535 (BWZ32_06525) | ppiD | 1351995..1353854 (+) | 1860 | WP_011078145.1 | peptidylprolyl isomerase | - |
| BWZ32_RS06540 (BWZ32_06530) | comEA | 1353987..1354289 (+) | 303 | WP_013572179.1 | ComEA family DNA-binding protein | Machinery gene |
| BWZ32_RS06545 (BWZ32_06535) | rrtA | 1354336..1354920 (-) | 585 | WP_011078143.1 | rhombosortase | - |
| BWZ32_RS06550 (BWZ32_06540) | - | 1354900..1355508 (+) | 609 | WP_101956801.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| BWZ32_RS06555 (BWZ32_06545) | - | 1355530..1356861 (-) | 1332 | WP_058645309.1 | anti-phage deoxyguanosine triphosphatase | - |
| BWZ32_RS06560 (BWZ32_06550) | yfbR | 1356867..1357451 (-) | 585 | WP_013572175.1 | 5'-deoxynucleotidase | - |
| BWZ32_RS06565 (BWZ32_06555) | - | 1357532..1358746 (-) | 1215 | WP_011080966.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 10900.72 Da Isoelectric Point: 9.6573
>NTDB_id=214827 BWZ32_RS06540 WP_013572179.1 1353987..1354289(+) (comEA) [Vibrio vulnificus strain VV2014DJH]
MKQVFTLLAMLMAFSFPSVSFADSATKAADKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREANGPFKTVDEL
AQVKGIGKSTIEKNQSRIKL
MKQVFTLLAMLMAFSFPSVSFADSATKAADKYEGIEISVNINTATAEEIAMMLKGVGIKKAQQIVDFREANGPFKTVDEL
AQVKGIGKSTIEKNQSRIKL
Nucleotide
Download Length: 303 bp
>NTDB_id=214827 BWZ32_RS06540 WP_013572179.1 1353987..1354289(+) (comEA) [Vibrio vulnificus strain VV2014DJH]
ATGAAACAGGTATTTACCCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCGGCCGATAAATATGAAGGCATTGAGATTTCCGTCAATATCAACACGGCGACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGACTTTAGAGAAGCTAATGGACCGTTTAAAACGGTTGATGAGTTA
GCTCAAGTGAAAGGAATCGGTAAATCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
ATGAAACAGGTATTTACCCTTTTAGCCATGCTAATGGCATTCTCTTTTCCTTCCGTTTCTTTTGCGGACTCTGCAACGAA
AGCGGCCGATAAATATGAAGGCATTGAGATTTCCGTCAATATCAACACGGCGACAGCAGAAGAAATTGCCATGATGTTAA
AAGGCGTTGGTATTAAAAAAGCTCAGCAAATTGTTGACTTTAGAGAAGCTAATGGACCGTTTAAAACGGTTGATGAGTTA
GCTCAAGTGAAAGGAATCGGTAAATCAACGATTGAGAAAAATCAGTCACGGATTAAGTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
59 |
100 |
0.59 |
| comEA | Vibrio campbellii strain DS40M4 |
54 |
100 |
0.54 |
| comEA | Vibrio cholerae C6706 |
52.041 |
98 |
0.51 |
| comEA | Vibrio cholerae strain A1552 |
52.041 |
98 |
0.51 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
60 |
60 |
0.36 |