Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   BWQ98_RS02415 Genome accession   NZ_CP019299
Coordinates   447101..447838 (+) Length   245 a.a.
NCBI ID   WP_001219126.1    Uniprot ID   A7XHJ0
Organism   Streptococcus pneumoniae strain HKU1-14     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 442101..452838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BWQ98_RS02385 (BWQ98_02390) - 443433..443720 (-) 288 WP_000777753.1 hypothetical protein -
  BWQ98_RS02390 (BWQ98_02395) - 443730..444140 (-) 411 WP_001278322.1 HIT family protein -
  BWQ98_RS02395 (BWQ98_02400) pptA 444208..444939 (+) 732 WP_000889956.1 ABC transporter ATP-binding protein Regulator
  BWQ98_RS02400 (BWQ98_02405) - 444936..445985 (+) 1050 WP_127244993.1 ABC transporter permease -
  BWQ98_RS02405 (BWQ98_02410) - 446153..446482 (-) 330 WP_000132572.1 hypothetical protein -
  BWQ98_RS02410 (BWQ98_02415) - 446758..447096 (+) 339 WP_050115203.1 LytTR family DNA-binding domain-containing protein -
  BWQ98_RS02415 (BWQ98_02420) comE/blpR 447101..447838 (+) 738 WP_001219126.1 response regulator transcription factor Regulator
  BWQ98_RS02420 (BWQ98_02425) - 447852..449192 (+) 1341 WP_127244994.1 sensor histidine kinase -
  BWQ98_RS02425 (BWQ98_02430) blpC 449236..449391 (-) 156 WP_061450964.1 quorum-sensing system pheromone BlpC -
  BWQ98_RS02430 (BWQ98_02435) - 449448..450809 (-) 1362 WP_050211505.1 bacteriocin secretion accessory protein -
  BWQ98_RS11765 comA/nlmT 450820..450984 (-) 165 WP_306420852.1 hypothetical protein Regulator
  BWQ98_RS11770 (BWQ98_02440) blpA 451194..452495 (-) 1302 Protein_455 peptide cleavage/export ABC transporter BlpA -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28752.92 Da        Isoelectric Point: 6.2357

>NTDB_id=214677 BWQ98_RS02415 WP_001219126.1 447101..447838(+) (comE/blpR) [Streptococcus pneumoniae strain HKU1-14]
MRIFVLEDDFSQQTRIETTIEKLLKAHHIIPSSFEVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIREQD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSPRPHRVILYTKTDRLEFTASLEEVFKQEPRLLQCHRSFLINPANVVHLDKKEKLLFFPNGGSCLIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=214677 BWQ98_RS02415 WP_001219126.1 447101..447838(+) (comE/blpR) [Streptococcus pneumoniae strain HKU1-14]
ATGAGAATATTTGTTTTAGAAGATGATTTTTCCCAACAGACTAGAATTGAAACGACGATTGAGAAACTTTTGAAAGCACA
TCATATCATTCCTAGCTCTTTTGAGGTATTTGGCAAGCCGGACCAACTGCTGGCAGAGGTGCATGAGAAGGGGGCCCATC
AGCTATTCTTTTTGGATATTGAGATTCGAAATGAAGAGATGAAGGGACTGGAAGTAGCTAGAAAGATTCGGGAACAAGAC
CCTTATGCCCTAATCGTCTTTGTGACGACTCACTCGGAGTTTATGCCTCTGTCCTTTCGCTACCAAGTGTCAGCTTTGGA
CTACATTGATAAGGCCCTTTCGGCAGAGGAGTTTGAATCTCGTATCGAGACAGCCCTCCTCTATGCCAATAGTCAAGATA
GTAAAAGTCTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCCCAATTCCAATATCCTTTCAAAGAGGTTTACTAT
CTCGAAACATCCCCAAGACCCCATCGTGTTATTCTCTATACCAAGACGGACAGGCTAGAATTTACGGCGAGTTTAGAGGA
GGTTTTTAAGCAGGAACCCCGTCTCTTGCAGTGCCATCGCTCTTTTCTCATCAATCCTGCAAATGTGGTGCATTTGGATA
AGAAAGAAAAACTCCTTTTCTTTCCCAATGGTGGAAGCTGTCTGATCGCGCGTTATAAGGTCAGGGAAGTGTCTGAGGCT
ATTAATAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7XHJ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

53.909

99.184

0.535

  comE/comE1 Streptococcus equinus JB1

43.882

96.735

0.424

  comE/comE2 Streptococcus equinus JB1

38.843

98.776

0.384


Multiple sequence alignment