Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BWP24_RS01750 | Genome accession | NZ_CP019293 |
| Coordinates | 366347..366883 (+) | Length | 178 a.a. |
| NCBI ID | WP_005432828.1 | Uniprot ID | A0A812GP34 |
| Organism | Vibrio campbellii strain LMB29 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 361347..371883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWP24_RS01735 (BWP24_01775) | uvrA | 361411..364233 (-) | 2823 | WP_077200162.1 | excinuclease ABC subunit UvrA | - |
| BWP24_RS01740 (BWP24_01780) | galU | 364372..365244 (-) | 873 | WP_005432802.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BWP24_RS01745 (BWP24_01785) | qstR | 365409..366053 (-) | 645 | WP_005432827.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| BWP24_RS01750 (BWP24_01790) | ssb | 366347..366883 (+) | 537 | WP_005432828.1 | single-stranded DNA-binding protein | Machinery gene |
| BWP24_RS01755 (BWP24_01795) | csrD | 367131..369140 (+) | 2010 | WP_077200163.1 | RNase E specificity factor CsrD | - |
| BWP24_RS01760 (BWP24_01800) | - | 369152..370600 (+) | 1449 | Protein_285 | MSHA biogenesis protein MshI | - |
| BWP24_RS01765 (BWP24_01805) | gspM | 370597..371247 (+) | 651 | WP_038891137.1 | type II secretion system protein GspM | - |
| BWP24_RS01770 (BWP24_01810) | - | 371240..371569 (+) | 330 | WP_005533781.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19774.84 Da Isoelectric Point: 4.9269
>NTDB_id=214630 BWP24_RS01750 WP_005432828.1 366347..366883(+) (ssb) [Vibrio campbellii strain LMB29]
MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYSTEVVVQGFNGVMQMLGGRAQGGAPMGGGQPQQQQQGGWGQPQQPAQQQYNAPQQQQQAPQQ
PQQQYNEPPMDFDDDIPF
MASRGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQREKTEWHRVVLFGKLAEVAGEYLRKGSQVYV
EGQLQTRKWQDQSGQDRYSTEVVVQGFNGVMQMLGGRAQGGAPMGGGQPQQQQQGGWGQPQQPAQQQYNAPQQQQQAPQQ
PQQQYNEPPMDFDDDIPF
Nucleotide
Download Length: 537 bp
>NTDB_id=214630 BWP24_RS01750 WP_005432828.1 366347..366883(+) (ssb) [Vibrio campbellii strain LMB29]
ATGGCCAGCCGTGGAATTAACAAAGTTATTTTGGTGGGGAATCTAGGTAACGACCCTGAAATTCGTTACATGCCTAATGG
CGGTGCAGTAGCAAACATCACGATTGCAACTTCTGAGTCATGGCGTGATAAAGCGACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTTGCTGAAGTAGCAGGTGAGTACCTACGTAAAGGTTCTCAAGTTTACGTT
GAAGGTCAACTTCAAACTCGTAAATGGCAAGACCAAAGTGGCCAAGACCGCTACTCAACAGAAGTGGTTGTTCAAGGCTT
CAATGGCGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGTGGCGCACCAATGGGTGGTGGTCAGCCTCAACAGCAGCAAC
AAGGTGGTTGGGGTCAACCTCAACAACCAGCTCAGCAGCAATACAATGCTCCTCAGCAACAGCAACAGGCTCCGCAGCAA
CCTCAGCAGCAATACAACGAGCCACCAATGGATTTCGACGATGATATTCCGTTCTAA
ATGGCCAGCCGTGGAATTAACAAAGTTATTTTGGTGGGGAATCTAGGTAACGACCCTGAAATTCGTTACATGCCTAATGG
CGGTGCAGTAGCAAACATCACGATTGCAACTTCTGAGTCATGGCGTGATAAAGCGACTGGCGAACAGCGCGAAAAAACAG
AATGGCACCGTGTTGTGCTGTTTGGCAAACTTGCTGAAGTAGCAGGTGAGTACCTACGTAAAGGTTCTCAAGTTTACGTT
GAAGGTCAACTTCAAACTCGTAAATGGCAAGACCAAAGTGGCCAAGACCGCTACTCAACAGAAGTGGTTGTTCAAGGCTT
CAATGGCGTAATGCAAATGCTTGGTGGCCGTGCTCAAGGTGGCGCACCAATGGGTGGTGGTCAGCCTCAACAGCAGCAAC
AAGGTGGTTGGGGTCAACCTCAACAACCAGCTCAGCAGCAATACAATGCTCCTCAGCAACAGCAACAGGCTCCGCAGCAA
CCTCAGCAGCAATACAACGAGCCACCAATGGATTTCGACGATGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
80.447 |
100 |
0.809 |
| ssb | Glaesserella parasuis strain SC1401 |
56.545 |
100 |
0.607 |
| ssb | Neisseria meningitidis MC58 |
48.333 |
100 |
0.489 |
| ssb | Neisseria gonorrhoeae MS11 |
48.333 |
100 |
0.489 |