Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | FORC54_RS14795 | Genome accession | NZ_CP019121 |
| Coordinates | 2930532..2931122 (-) | Length | 196 a.a. |
| NCBI ID | WP_101958983.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus strain FORC_054 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2925532..2936122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC54_RS14775 (FORC54_2660) | aroB | 2926388..2927479 (-) | 1092 | WP_011079358.1 | 3-dehydroquinate synthase | - |
| FORC54_RS14780 (FORC54_2661) | aroK | 2927512..2928030 (-) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| FORC54_RS14785 (FORC54_2662) | pilQ | 2928232..2930016 (-) | 1785 | WP_017419660.1 | type IV pilus secretin PilQ | Machinery gene |
| FORC54_RS14790 (FORC54_2663) | pilP | 2930030..2930542 (-) | 513 | WP_101958982.1 | pilus assembly protein PilP | Machinery gene |
| FORC54_RS14795 (FORC54_2664) | pilO | 2930532..2931122 (-) | 591 | WP_101958983.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FORC54_RS14800 (FORC54_2665) | pilN | 2931115..2931705 (-) | 591 | WP_045609935.1 | PilN domain-containing protein | Machinery gene |
| FORC54_RS14805 (FORC54_2666) | pilM | 2931695..2932702 (-) | 1008 | WP_017419656.1 | type IV pilus assembly protein PilM | Machinery gene |
| FORC54_RS14810 (FORC54_2667) | - | 2932842..2935355 (+) | 2514 | WP_101958984.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22721.19 Da Isoelectric Point: 5.0836
>NTDB_id=213348 FORC54_RS14795 WP_101958983.1 2930532..2931122(-) (pilO) [Vibrio vulnificus strain FORC_054]
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMATEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMATEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
Nucleotide
Download Length: 591 bp
>NTDB_id=213348 FORC54_RS14795 WP_101958983.1 2930532..2931122(-) (pilO) [Vibrio vulnificus strain FORC_054]
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGCCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAAGAGTTGGCGACGATGCTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGCCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAAGAGTTGGCGACGATGCTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
73.016 |
96.429 |
0.704 |
| pilO | Vibrio cholerae strain A1552 |
67.347 |
100 |
0.673 |