Detailed information NTG0211330

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: BLE401_RS09930
• Genome accession: NZ_CP018889
• Coordinates: 2384942..2386027 (-)
• Length: 361 a.a.
• NCBI ID: WP_062152374.1
• Uniprot ID: -
• Organism: Beggiatoa leptomitoformis strain D-401
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2379942..2391027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLE401_RS09910 (BLE401_14450)	pilQ	2380700..2382799 (-)	2100	WP_062152366.1	type IV pilus secretin family protein	-
BLE401_RS09915 (BLE401_14445)	-	2382897..2383454 (-)	558	WP_062152368.1	pilus assembly protein PilP	-
BLE401_RS09920 (BLE401_14440)	-	2383597..2384238 (-)	642	WP_083991489.1	type 4a pilus biogenesis protein PilO	-
BLE401_RS09925 (BLE401_14435)	-	2384243..2384887 (-)	645	WP_062152372.1	PilN domain-containing protein	-
BLE401_RS09930 (BLE401_14430)	pilM	2384942..2386027 (-)	1086	WP_062152374.1	pilus assembly protein PilM	Machinery gene
BLE401_RS09935 (BLE401_14425)	-	2386168..2388762 (+)	2595	WP_062152376.1	penicillin-binding protein 1A	-
BLE401_RS09940 (BLE401_14420)	plsY	2388764..2389378 (+)	615	WP_062152378.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
BLE401_RS09945 (BLE401_14415)	-	2389448..2390196 (+)	749	WP_101539186.1	IS5 family transposase	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39617.20 Da
• Isoelectric Point: 4.6336

>NTDB_id=211330 BLE401_RS09930 WP_062152374.1 2384942..2386027(-) (pilM) [Beggiatoa leptomitoformis strain D-401]
MGIFSLKPEPLVGIDISSTAVKLLELSRAGNNYKVESYAIEPLPEKAVEDKNVVELETVGEAISRVVRRAKPKAQFSAVA
VSGPAVITKIIEMDKGMSDDERRALIEADAEQYIPYPLDEISFDFEVIGPNDKDPETRMDVLLAASRSENVEIRIASAEL
GGLKVRVVDIEKYALENAFRLLAESDPEINVDETIGLVDVGATTTTINVLGNNKIVYSREELFGGKRLTENIQHRYGISY
EEANLAKRNGGLPDDYEIEVLEPFKAEMAQQISRMVQYYYSSDASPKYGQLSHILIAGGCASIPGIIEHVSNKVGGHVTI
ANPFASMSLSAKVPKKDLMRDAPALMIACGLALRTFDKFNY

Nucleotide

• Length: 1086 bp

>NTDB_id=211330 BLE401_RS09930 WP_062152374.1 2384942..2386027(-) (pilM) [Beggiatoa leptomitoformis strain D-401]
GTGGGAATCTTTAGTTTAAAGCCTGAACCGCTGGTGGGCATAGATATAAGCTCTACAGCCGTTAAACTACTTGAACTCAG
CCGAGCGGGTAATAACTACAAGGTTGAGAGTTACGCGATAGAACCCTTGCCAGAAAAAGCGGTAGAGGATAAAAACGTCG
TCGAACTAGAAACTGTTGGTGAGGCCATTAGTCGTGTTGTTCGCCGTGCTAAGCCAAAAGCACAGTTTTCTGCGGTTGCT
GTTTCTGGTCCTGCCGTGATTACCAAAATCATCGAAATGGACAAAGGCATGTCAGATGATGAACGACGCGCCCTGATTGA
AGCCGATGCTGAGCAATATATCCCTTACCCCTTAGACGAAATCAGCTTTGACTTTGAGGTTATTGGTCCTAATGATAAAG
ACCCTGAGACACGCATGGATGTTCTTTTAGCTGCCTCGCGTAGTGAAAATGTTGAAATACGCATTGCAAGTGCAGAACTG
GGTGGATTAAAAGTCAGGGTCGTGGACATTGAAAAGTATGCACTCGAAAATGCGTTTCGTCTATTGGCAGAAAGCGATCC
TGAAATTAACGTGGATGAAACCATTGGTTTAGTCGATGTAGGTGCAACAACCACAACGATTAATGTATTAGGGAATAATA
AGATTGTCTATTCGCGTGAAGAGTTATTTGGTGGTAAACGACTCACCGAAAATATTCAGCATCGTTATGGTATTAGTTAT
GAAGAAGCCAACTTAGCAAAGCGTAACGGTGGATTGCCAGACGATTATGAAATTGAAGTATTAGAACCCTTTAAAGCAGA
AATGGCACAACAAATTAGCCGTATGGTGCAATATTACTATTCATCAGATGCTTCTCCGAAATATGGGCAGTTATCACATA
TTCTCATCGCGGGTGGTTGTGCGTCCATTCCGGGCATTATAGAACATGTCAGTAATAAGGTTGGAGGGCATGTCACGATT
GCAAATCCTTTCGCTTCCATGTCGTTATCCGCTAAAGTTCCTAAGAAGGATTTAATGCGCGATGCCCCTGCATTAATGAT
TGCATGTGGGTTAGCATTGCGGACTTTTGACAAATTTAATTATTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-356)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.009	96.122	0.49
comM	Acinetobacter nosocomialis M2	51.009	96.122	0.49
comM	Acinetobacter baylyi ADP1	49.138	96.399	0.474
pilM	Legionella pneumophila strain ERS1305867	41.88	97.23	0.407