Detailed information NTG0210885

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: Tchl_RS06850
• Genome accession: NZ_CP018839
• Coordinates: 1448953..1450455 (+)
• Length: 500 a.a.
• NCBI ID: WP_075147737.1
• Uniprot ID: -
• Organism: Thauera chlorobenzoica strain 3CB1
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1443953..1455455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Tchl_RS06825 (Tchl_1368)	glnK	1444875..1445213 (-)	339	WP_075147733.1	P-II family nitrogen regulator	-
Tchl_RS06830 (Tchl_1369)	-	1445241..1445951 (-)	711	WP_075147734.1	TorF family putative porin	-
Tchl_RS06835 (Tchl_1370)	-	1446223..1446480 (+)	258	WP_075147735.1	accessory factor UbiK family protein	-
Tchl_RS06840 (Tchl_1371)	-	1446541..1447851 (-)	1311	WP_075147736.1	ISL3 family transposase	-
Tchl_RS06845 (Tchl_1372)	-	1447937..1448737 (-)	801	WP_075149624.1	Fic family protein	-
Tchl_RS06850 (Tchl_1374)	comM	1448953..1450455 (+)	1503	WP_075147737.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
Tchl_RS06855 (Tchl_1375)	-	1450593..1451792 (+)	1200	WP_075147738.1	multidrug effflux MFS transporter	-
Tchl_RS06860 (Tchl_1376)	-	1451937..1452776 (+)	840	WP_075147739.1	ABC transporter ATP-binding protein	-
Tchl_RS06865 (Tchl_1377)	-	1452776..1453480 (+)	705	WP_075147740.1	ABC transporter ATP-binding protein	-
Tchl_RS06870 (Tchl_1378)	-	1453493..1454362 (+)	870	WP_075147741.1	branched-chain amino acid ABC transporter permease	-
Tchl_RS06875 (Tchl_1379)	-	1454446..1455393 (+)	948	WP_075147742.1	branched-chain amino acid ABC transporter permease	-

Sequence

Protein

• Length: 500 a.a.
• Molecular weight: 52614.32 Da
• Isoelectric Point: 8.4384

>NTDB_id=210885 Tchl_RS06850 WP_075147737.1 1448953..1450455(+) (comM) [Thauera chlorobenzoica strain 3CB1]
MSLALVRARALDGLDAPEVAVEVHLANGLPAFSLVGLPDTEVREARDRVRAAILSSQFEFPQRRITVNLAPADLPKEGGR
FDLAIAVGILVASGQVAAERLEALEFCGELSLNGALRPVRGVLAAALAAGRGQRALLLPAGNAAEAALARRTTVLPAASL
LAVCAHLNGHTALEPQPRAAPAAVGGSAVPDLAEVRGQLQARRALEVAAAGAHSLLLFGPPGTGKSMLAQRLPGVLPPMG
EDEALEAAALASIEGDFDPRDWGRRPFRAPHHSASAAALVGGGAIPRPGEISLAHHGVLFLDELPEFDRRVLEALREPLE
SGTVTVSRARRRAEFPARFQLVAAMNPCPCGHAGDPRRACRCTPDQVARYRGRLSGPLLDRIDLTVEVPSIETEALLGSP
AGESSAVVRARVEAARARQLARQGGPNAHLGPAEVVRHCTPDERGEALLRQAMKQLALSARAYHRVLRVARTLADLSGCE
RPGAAQVAEAVQCRRSLDAR

Nucleotide

• Length: 1503 bp

>NTDB_id=210885 Tchl_RS06850 WP_075147737.1 1448953..1450455(+) (comM) [Thauera chlorobenzoica strain 3CB1]
ATGTCGCTTGCGCTCGTGCGCGCCCGCGCCCTCGATGGCCTCGATGCCCCCGAGGTCGCGGTCGAAGTCCATCTCGCCAA
CGGCCTGCCTGCGTTCAGCCTGGTCGGCCTGCCCGACACCGAGGTGCGCGAAGCGCGTGACCGGGTGCGGGCGGCGATCC
TGTCCTCCCAGTTCGAGTTTCCCCAGCGCCGCATCACCGTCAACCTGGCCCCGGCCGACCTGCCCAAGGAAGGCGGGCGC
TTCGATCTGGCGATCGCGGTGGGGATTCTCGTCGCCTCCGGCCAGGTCGCGGCGGAGCGCCTCGAGGCGCTCGAATTCTG
CGGCGAGCTGTCGCTCAACGGCGCGCTGCGCCCGGTGCGCGGGGTGCTGGCGGCGGCGCTCGCGGCCGGGCGGGGGCAGC
GCGCGCTGCTGCTGCCGGCCGGCAATGCGGCCGAGGCCGCGCTCGCGCGGCGCACCACGGTGCTGCCGGCGGCGAGCCTG
CTCGCCGTATGCGCCCACCTCAATGGCCACACTGCGCTCGAACCGCAGCCGCGCGCCGCACCCGCCGCCGTGGGCGGTAG
CGCGGTGCCCGATCTTGCCGAGGTGCGCGGCCAGCTGCAGGCGCGGCGCGCGCTCGAAGTGGCGGCGGCCGGGGCGCATT
CGCTGCTGCTGTTCGGTCCGCCCGGCACCGGCAAGTCGATGCTCGCCCAGCGCCTGCCCGGGGTGCTGCCGCCGATGGGC
GAGGACGAGGCCCTGGAGGCGGCGGCACTCGCTTCCATCGAGGGCGATTTCGACCCCCGCGACTGGGGGCGGCGGCCGTT
TCGCGCCCCCCATCACTCGGCTTCGGCGGCGGCGCTGGTCGGTGGCGGGGCGATTCCCCGCCCCGGAGAAATCTCGCTCG
CCCATCACGGCGTGTTGTTCCTCGACGAGCTGCCCGAGTTCGACCGCCGCGTCCTCGAGGCGCTGCGCGAGCCGCTCGAA
AGCGGCACGGTCACCGTCTCGCGCGCGCGCCGGCGGGCCGAGTTTCCGGCCCGCTTCCAGCTCGTCGCGGCGATGAATCC
CTGCCCCTGCGGCCATGCCGGCGATCCGCGCCGGGCCTGCCGGTGCACCCCCGATCAGGTCGCACGCTACCGGGGGCGGC
TGTCCGGGCCCTTGCTCGACCGCATCGATCTCACCGTCGAGGTGCCGTCGATCGAGACCGAGGCCCTGCTCGGCAGCCCG
GCGGGAGAAAGCTCGGCGGTGGTGCGGGCGCGGGTGGAGGCGGCGCGGGCGCGCCAGCTCGCCCGCCAGGGCGGGCCGAA
CGCGCACCTGGGGCCGGCCGAGGTGGTGCGCCACTGCACCCCCGACGAGCGCGGCGAGGCCTTGCTGCGCCAGGCGATGA
AACAGCTCGCGCTGTCGGCGAGGGCGTATCATCGCGTCCTTCGGGTGGCGCGCACGCTGGCCGATCTGTCCGGGTGCGAG
CGCCCCGGCGCGGCCCAGGTCGCCGAGGCGGTCCAGTGCCGGCGCAGTCTCGATGCCCGCTGA

Domains

Predicted by InterproScan.

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-395)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	53.629	99.2	0.532
comM	Vibrio campbellii strain DS40M4	52.811	99.6	0.526
comM	Haemophilus influenzae Rd KW20	51.703	99.8	0.516
comM	Glaesserella parasuis strain SC1401	49.8	100	0.498
comM	Legionella pneumophila str. Paris	48.4	100	0.484
comM	Legionella pneumophila strain ERS1305867	48.4	100	0.484
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	44.576	100	0.452