Detailed information NTG0208622

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BS615_RS08390
• Genome accession: NZ_CP018421
• Coordinates: 1783348..1784049 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain XDR-BJ83 isolate male patient
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1778348..1789049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BS615_RS08355 (BS615_08365)	kdsB	1778871..1779632 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
BS615_RS08360 (BS615_08370)	-	1779644..1780624 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
BS615_RS08365 (BS615_08375)	-	1780636..1780977 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
BS615_RS08370 (BS615_08380)	-	1780995..1781768 (+)	774	WP_000497298.1	TatD family hydrolase	-
BS615_RS08375 (BS615_08385)	-	1781806..1782414 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BS615_RS08380 (BS615_08390)	-	1782424..1782978 (+)	555	WP_000841373.1	type II secretion system protein	-
BS615_RS08385 (BS615_08395)	xcpV	1782968..1783348 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BS615_RS08390 (BS615_08400)	xcpW	1783348..1784049 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BS615_RS08395 (BS615_08405)	gspK	1784049..1785008 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
BS615_RS08400 (BS615_08410)	-	1785239..1785835 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
BS615_RS08405 (BS615_08415)	ung	1785886..1786599 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
BS615_RS08410 (BS615_08420)	-	1786596..1787720 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BS615_RS08415 (BS615_08425)	tadA	1787727..1788230 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
BS615_RS08420 (BS615_08430)	-	1788300..1788743 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=208622 BS615_RS08390 WP_000594589.1 1783348..1784049(+) (xcpW) [Acinetobacter baumannii strain XDR-BJ83 isolate male patient]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=208622 BS615_RS08390 WP_000594589.1 1783348..1784049(+) (xcpW) [Acinetobacter baumannii strain XDR-BJ83 isolate male patient]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996