Detailed information NTG0206860

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: BSR19_RS07560
• Genome accession: NZ_CP018187
• Coordinates: 1681684..1682610 (-)
• Length: 308 a.a.
• NCBI ID: WP_156246942.1
• Uniprot ID: A0AB37DB61
• Organism: Streptococcus salivarius strain ICDC2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1676684..1687610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR19_RS07530 (BSR19_07645)	-	1676763..1677557 (-)	795	WP_156246939.1	HAD-IIB family hydrolase	-
BSR19_RS07535 (BSR19_07650)	-	1677739..1678116 (+)	378	WP_022496273.1	GntR family transcriptional regulator	-
BSR19_RS07540 (BSR19_07655)	-	1678121..1678819 (+)	699	WP_156246941.1	ABC transporter ATP-binding protein	-
BSR19_RS07545 (BSR19_07660)	-	1678831..1679616 (+)	786	WP_021143813.1	hypothetical protein	-
BSR19_RS07550 (BSR19_07665)	amiF	1679667..1680596 (-)	930	WP_022496727.1	ATP-binding cassette domain-containing protein	Regulator
BSR19_RS07555 (BSR19_07670)	amiE	1680589..1681674 (-)	1086	WP_049554143.1	ABC transporter ATP-binding protein	Regulator
BSR19_RS07560 (BSR19_07675)	amiD	1681684..1682610 (-)	927	WP_156246942.1	oligopeptide ABC transporter permease OppC	Regulator
BSR19_RS07565 (BSR19_07680)	amiC	1682610..1684103 (-)	1494	WP_156246943.1	ABC transporter permease	Regulator
BSR19_RS07570 (BSR19_07685)	amiA	1684164..1686134 (-)	1971	WP_002884208.1	peptide ABC transporter substrate-binding protein	Regulator
BSR19_RS07575 (BSR19_07690)	pta	1686370..1687353 (-)	984	WP_037598296.1	phosphate acetyltransferase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34637.76 Da
• Isoelectric Point: 9.7054

>NTDB_id=206860 BSR19_RS07560 WP_156246942.1 1681684..1682610(-) (amiD) [Streptococcus salivarius strain ICDC2]
MASIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFFKKKSTTVMLGILITIILMSFIYPMFSKFDFNDVSKVNDFSVR
YVHPNGQYWFGTDSNGKSLFDSVWFGARNSILIAVIATFLNVVIGVLVGAVWGISKTFDMIMMEIYNIISNIPALLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRTLGTPTPKIVVKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=206860 BSR19_RS07560 WP_156246942.1 1681684..1682610(-) (amiD) [Streptococcus salivarius strain ICDC2]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCAGCCTA
TTCTTACTGGAAATCGGTGATGCGTCAGTTCTTCAAGAAAAAGTCAACAACTGTCATGTTGGGAATCTTGATTACTATCA
TTTTGATGAGTTTTATCTACCCGATGTTTTCAAAATTTGACTTTAATGATGTGTCTAAGGTTAATGACTTTAGTGTACGT
TATGTGCATCCTAATGGCCAGTATTGGTTTGGTACAGATAGTAACGGGAAATCCCTCTTCGATAGTGTTTGGTTTGGAGC
TCGTAATTCTATCCTTATTGCTGTTATCGCTACCTTCCTTAACGTTGTTATTGGTGTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCTGCCCTCCTTGTAGTTATCGTC
TTGACTTACTCATTGGGTGCTGGTTTCTGGAATATGATCTTTGCCATGACTGTTACAGGGTGGATTGGTATTGCCTATAC
TATCCGTATTCAAATCATGCGTTACCGTGATTTGGAGTATAACTTGGCTTCTCGTACACTGGGAACACCAACTCCTAAGA
TTGTGGTTAAAAACATCATGCCACAACTAGTATCAGTTATCGTAACTATGGCTAGTCAGCTCTTGCCAGGATTTATCTCT
TACGAAGCCTTCCTTTCATACTTTGGTTTAGGGCTTCCTGTTACGACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAACGTTACAGTCAATGCTTATCTCTTCTGGATTCCATTGACTACCTTGATCCTCGTTTCCCTTGCTCTCTTTATTG
TCGGTCAAAACTTGGCGGATGCCAGCGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-70)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	98.052	100	0.981
amiD	Streptococcus thermophilus LMG 18311	96.429	100	0.964
amiD	Streptococcus thermophilus LMD-9	96.429	100	0.964