Detailed information NTG0205795

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: BRL64_RS19630
• Genome accession: NZ_CP018100
• Coordinates: 3217188..3217844 (-)
• Length: 218 a.a.
• NCBI ID: WP_231293932.1
• Uniprot ID: -
• Organism: Bacillus safensis strain BRM1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3212188..3222844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BRL64_RS16820 (BRL64_16525)	fliW	3212326..3212760 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
BRL64_RS16825 (BRL64_16530)	-	3212789..3213367 (-)	579	WP_081124902.1	DUF6470 family protein	-
BRL64_RS16830 (BRL64_16535)	flgL	3213414..3214322 (-)	909	WP_081124903.1	flagellar hook-associated protein FlgL	-
BRL64_RS16835 (BRL64_16540)	flgK	3214332..3215852 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
BRL64_RS16840 (BRL64_16545)	-	3215868..3216350 (-)	483	WP_024423619.1	flagellar protein FlgN	-
BRL64_RS16845 (BRL64_16550)	flgM	3216369..3216632 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
BRL64_RS16850 (BRL64_16555)	-	3216712..3217131 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
BRL64_RS19630 (BRL64_16560)	comFC	3217188..3217844 (-)	657	WP_231293932.1	ComF family protein	Machinery gene
BRL64_RS16860 (BRL64_16565)	-	3217871..3218164 (-)	294	WP_024423623.1	late competence development ComFB family protein	-
BRL64_RS16865 (BRL64_16570)	comFA	3218213..3219610 (-)	1398	WP_139142199.1	DEAD/DEAH box helicase	Machinery gene
BRL64_RS16870 (BRL64_16575)	-	3219731..3220573 (-)	843	WP_024423625.1	DegV family protein	-
BRL64_RS16875 (BRL64_16580)	degU	3220789..3221478 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BRL64_RS16880 (BRL64_16585)	degS	3221543..3222718 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24954.07 Da
• Isoelectric Point: 10.0431

>NTDB_id=205795 BRL64_RS19630 WP_231293932.1 3217188..3217844(-) (comFC) [Bacillus safensis strain BRM1]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNRWNERSDSTKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALVELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAVVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=205795 BRL64_RS19630 WP_231293932.1 3217188..3217844(-) (comFC) [Bacillus safensis strain BRM1]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACGTGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGATGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGTTGAGCTGTTTAAAAGAGATGTGCAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCAATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGGTTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362