Detailed information NTG0205789

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BRL64_RS16880
• Genome accession: NZ_CP018100
• Coordinates: 3221543..3222718 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain BRM1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3216543..3227718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BRL64_RS16850 (BRL64_16555)	-	3216712..3217131 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
BRL64_RS19630 (BRL64_16560)	comFC	3217188..3217844 (-)	657	WP_231293932.1	ComF family protein	Machinery gene
BRL64_RS16860 (BRL64_16565)	-	3217871..3218164 (-)	294	WP_024423623.1	late competence development ComFB family protein	-
BRL64_RS16865 (BRL64_16570)	comFA	3218213..3219610 (-)	1398	WP_139142199.1	DEAD/DEAH box helicase	Machinery gene
BRL64_RS16870 (BRL64_16575)	-	3219731..3220573 (-)	843	WP_024423625.1	DegV family protein	-
BRL64_RS16875 (BRL64_16580)	degU	3220789..3221478 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
BRL64_RS16880 (BRL64_16585)	degS	3221543..3222718 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
BRL64_RS16885 (BRL64_16590)	-	3222939..3223607 (+)	669	WP_012011434.1	YigZ family protein	-
BRL64_RS16890 (BRL64_16595)	-	3223592..3224683 (+)	1092	WP_081124904.1	LCP family protein	-
BRL64_RS16895 (BRL64_16600)	-	3224719..3225786 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
BRL64_RS16900 (BRL64_16605)	tuaH	3225921..3227117 (-)	1197	WP_025093964.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=205789 BRL64_RS16880 WP_003213166.1 3221543..3222718(-) (degS) [Bacillus safensis strain BRM1]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=205789 BRL64_RS16880 WP_003213166.1 3221543..3222718(-) (degS) [Bacillus safensis strain BRM1]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGGTTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGACTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTAAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841