Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   BBN63_RS36970 Genome accession   NZ_CP018047
Coordinates   7977308..7977412 (+) Length   34 a.a.
NCBI ID   WP_237285857.1    Uniprot ID   -
Organism   Streptomyces niveus strain SCSIO 3406     
Function   phosphorylate ComE (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 7977715..7978815 7977308..7977412 flank 303


Gene organization within MGE regions


Location: 7977308..7978815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBN63_RS36970 stkP 7977308..7977412 (+) 105 WP_237285857.1 protein kinase domain-containing protein Regulator
  BBN63_RS35125 (BBN63_34450) - 7977772..7978717 (+) 946 Protein_6955 IS481 family transposase -

Sequence

Protein


Download         Length: 34 a.a.        Molecular weight: 3673.27 Da        Isoelectric Point: 7.2007

>NTDB_id=205346 BBN63_RS36970 WP_237285857.1 7977308..7977412(+) (stkP) [Streptomyces niveus strain SCSIO 3406]
MHEAGLTHRDIKPSNIMVLPDGGAKVVDFGRPTL

Nucleotide


Download         Length: 105 bp        

>NTDB_id=205346 BBN63_RS36970 WP_237285857.1 7977308..7977412(+) (stkP) [Streptomyces niveus strain SCSIO 3406]
GTGCACGAAGCGGGACTGACGCACCGGGACATCAAGCCGTCCAACATCATGGTCCTGCCTGACGGCGGGGCGAAGGTGGT
CGACTTCGGGCGGCCGACGCTATGA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(1-30)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae Rx1

62.069

85.294

0.529
  stkP Streptococcus pneumoniae D39

62.069

85.294

0.529
  stkP Streptococcus pneumoniae R6

62.069

85.294

0.529
  stkP Streptococcus pneumoniae TIGR4

62.069

85.294

0.529
  stkP/pknB Streptococcus salivarius strain HSISS4

55.172

85.294

0.471
  pknB Streptococcus mutans UA159

55.172

85.294

0.471

Multiple sequence alignment