Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | BI355_RS03285 | Genome accession | NZ_CP017996 |
| Coordinates | 654340..654615 (+) | Length | 91 a.a. |
| NCBI ID | WP_057866609.1 | Uniprot ID | A0A837RK71 |
| Organism | Companilactobacillus crustorum strain MN047 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 649340..659615
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI355_RS03270 (BI355_0640) | - | 651577..652314 (+) | 738 | WP_057866612.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| BI355_RS03275 (BI355_0641) | comGA | 652393..653361 (+) | 969 | WP_075887483.1 | competence type IV pilus ATPase ComGA | - |
| BI355_RS03280 (BI355_0642) | - | 653327..654340 (+) | 1014 | WP_057866610.1 | type II secretion system F family protein | - |
| BI355_RS03285 (BI355_0643) | comGC | 654340..654615 (+) | 276 | WP_057866609.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BI355_RS03290 | - | 654612..654908 (+) | 297 | WP_075887484.1 | type II secretion system protein | - |
| BI355_RS03295 (BI355_0645) | - | 655038..655325 (+) | 288 | WP_075887485.1 | hypothetical protein | - |
| BI355_RS03300 (BI355_0646) | - | 655297..655746 (+) | 450 | WP_057866606.1 | competence type IV pilus minor pilin ComGF | - |
| BI355_RS03310 (BI355_0648) | - | 656012..657025 (+) | 1014 | WP_057866604.1 | class I SAM-dependent methyltransferase | - |
| BI355_RS03315 (BI355_0649) | - | 657036..658232 (+) | 1197 | WP_057866603.1 | acetate/propionate family kinase | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10604.53 Da Isoelectric Point: 8.4500
>NTDB_id=204921 BI355_RS03285 WP_057866609.1 654340..654615(+) (comGC) [Companilactobacillus crustorum strain MN047]
MKKIHKAFTLIEMVIVLFIISLLLLIMIPNLVAQKNHAEDRSQEAFITTIKTQKELYSDNEGKIPSLGELEKEKYITQKQ
YEKAQKIDELK
MKKIHKAFTLIEMVIVLFIISLLLLIMIPNLVAQKNHAEDRSQEAFITTIKTQKELYSDNEGKIPSLGELEKEKYITQKQ
YEKAQKIDELK
Nucleotide
Download Length: 276 bp
>NTDB_id=204921 BI355_RS03285 WP_057866609.1 654340..654615(+) (comGC) [Companilactobacillus crustorum strain MN047]
ATGAAAAAAATTCACAAGGCTTTTACTTTAATTGAGATGGTAATTGTACTTTTTATTATTTCACTGTTGTTACTAATTAT
GATCCCTAATTTGGTGGCTCAAAAAAATCATGCTGAAGATAGATCCCAAGAAGCATTTATTACAACCATCAAAACTCAGA
AGGAACTATATTCTGATAACGAAGGAAAAATACCTTCATTGGGTGAATTAGAAAAAGAAAAATATATAACTCAAAAACAA
TATGAAAAAGCTCAAAAAATTGATGAACTAAAATGA
ATGAAAAAAATTCACAAGGCTTTTACTTTAATTGAGATGGTAATTGTACTTTTTATTATTTCACTGTTGTTACTAATTAT
GATCCCTAATTTGGTGGCTCAAAAAAATCATGCTGAAGATAGATCCCAAGAAGCATTTATTACAACCATCAAAACTCAGA
AGGAACTATATTCTGATAACGAAGGAAAAATACCTTCATTGGGTGAATTAGAAAAAGAAAAATATATAACTCAAAAACAA
TATGAAAAAGCTCAAAAAATTGATGAACTAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Latilactobacillus sakei subsp. sakei 23K |
54.651 |
94.505 |
0.516 |
| comYC | Streptococcus mutans UA140 |
44.048 |
92.308 |
0.407 |
| comYC | Streptococcus mutans UA159 |
44.048 |
92.308 |
0.407 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
41.667 |
92.308 |
0.385 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
43.21 |
89.011 |
0.385 |
| comGC/cglC | Streptococcus mitis SK321 |
44 |
82.418 |
0.363 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
44 |
82.418 |
0.363 |