Detailed information NTG0204330

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: BMF34_RS04795
• Genome accession: NZ_CP017952
• Coordinates: 960407..961252 (+)
• Length: 281 a.a.
• NCBI ID: WP_003099573.1
• Uniprot ID: A0A1J0MYY1
• Organism: Streptococcus iniae strain 89353
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 955407..966252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BMF34_RS04770 (BMF34_04715)	-	955529..956851 (+)	1323	WP_225111305.1	PTS sugar transporter subunit IIC	-
BMF34_RS04775 (BMF34_04720)	-	956848..957687 (+)	840	WP_003099563.1	alpha/beta hydrolase	-
BMF34_RS04780 (BMF34_04725)	ylqF	958157..959011 (+)	855	WP_003099566.1	ribosome biogenesis GTPase YlqF	-
BMF34_RS04785 (BMF34_04730)	-	958995..959780 (+)	786	WP_003099568.1	ribonuclease HII	-
BMF34_RS04790 (BMF34_04735)	-	959793..960341 (+)	549	WP_003099570.1	sugar O-acetyltransferase	-
BMF34_RS04795 (BMF34_04740)	dprA	960407..961252 (+)	846	WP_003099573.1	DNA-processing protein DprA	Machinery gene
BMF34_RS04800 (BMF34_04745)	topA	961349..963484 (+)	2136	WP_003099575.1	type I DNA topoisomerase	-
BMF34_RS04805 (BMF34_04750)	-	963578..964462 (-)	885	WP_003099578.1	LysR family transcriptional regulator	-
BMF34_RS04810 (BMF34_04755)	-	964628..965686 (+)	1059	WP_003099589.1	PTS transporter subunit IIC	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31550.74 Da
• Isoelectric Point: 9.9826

>NTDB_id=204330 BMF34_RS04795 WP_003099573.1 960407..961252(+) (dprA) [Streptococcus iniae strain 89353]
MNNFELYKLKKAGLKNHHILNIIHYSQQTKKSLSLRNMAVVSGTSKPCLFLENYKLLNIKELRVEFKKYPSFSILDKTYP
LALKEIDNPPVLLFYQGNLELLNRHKLAVVGSRKSSAVGNKSVESLIKQLNNQFVIVSGLARGIDTVAHFSSIKQGGETI
AVIGSGLDIYYPKENRRLQEFIAEKHLLLSEYCPKEAPLAHHFPERNRIIAGLSMGVLVAEAKWRSGSLITCRFALDYGR
DIFVVPGAILDKQSQGGNHLIQEGAKLVTKGLDIISEYQFL

Nucleotide

• Length: 846 bp

>NTDB_id=204330 BMF34_RS04795 WP_003099573.1 960407..961252(+) (dprA) [Streptococcus iniae strain 89353]
ATGAATAACTTTGAACTGTATAAATTAAAGAAAGCTGGCCTAAAAAATCATCATATTCTAAATATCATTCATTATAGCCA
GCAAACTAAGAAATCTCTATCACTTAGAAATATGGCTGTTGTTTCAGGAACAAGTAAACCATGTCTGTTTTTAGAAAATT
ACAAGCTGTTAAATATAAAAGAGTTACGAGTAGAATTTAAGAAGTATCCCAGCTTTTCAATTTTAGACAAGACCTATCCC
CTTGCTTTAAAAGAAATTGATAATCCGCCAGTATTATTATTTTATCAAGGAAATTTAGAGCTTTTAAATCGGCATAAATT
AGCAGTGGTAGGGTCAAGGAAATCCTCAGCAGTTGGAAACAAATCTGTTGAATCTCTCATCAAGCAACTTAATAATCAGT
TTGTTATTGTTAGTGGGTTGGCTAGAGGAATTGATACTGTAGCTCATTTTTCGAGCATCAAACAAGGTGGAGAGACTATT
GCTGTTATTGGATCAGGGTTAGACATTTATTATCCTAAGGAAAATAGAAGATTACAGGAGTTTATTGCTGAAAAGCATTT
ATTATTAAGTGAATATTGCCCTAAGGAAGCACCTTTAGCACATCATTTTCCAGAACGAAATCGCATAATTGCAGGCTTAT
CTATGGGAGTTTTAGTGGCAGAAGCCAAATGGCGTTCTGGTAGTCTAATCACTTGTCGCTTTGCACTTGATTACGGTAGG
GATATTTTTGTTGTTCCAGGCGCCATCCTTGACAAACAGTCGCAGGGAGGGAATCACCTCATTCAAGAGGGAGCGAAGCT
TGTTACAAAAGGACTTGACATCATTTCTGAATACCAATTTTTATAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

3D structure

• AlphaFold DB: A0A1J0MYY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	66.786	99.644	0.665
dprA/cilB/dalA	Streptococcus mitis SK321	57.5	99.644	0.573
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.143	99.644	0.569
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	56.786	99.644	0.566
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	99.644	0.544