Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | SPG_1966 | Genome accession | CP001015 |
| Coordinates | 1862286..1862612 (-) | Length | 108 a.a. |
| NCBI ID | ACF55098.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae G54 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1857286..1867612
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPG_1956 | rnpA | 1857303..1857674 (-) | 372 | ACF55368.1 | ribonuclease P protein component | - |
| SPG_1957 | - | 1857691..1857822 (-) | 132 | ACF54788.1 | conserved hypothetical protein | - |
| SPG_1958 | ackA | 1857823..1859013 (-) | 1191 | ACF56573.1 | acetate kinase | - |
| SPG_1959 | comYH | 1859064..1860017 (-) | 954 | ACF56004.1 | conserved hypothetical protein | Machinery gene |
| SPG_1960 | - | 1860078..1860458 (-) | 381 | ACF56765.1 | hypothetical protein | - |
| SPG_1961 | - | 1860490..1860672 (-) | 183 | ACF55149.1 | conserved hypothetical protein | - |
| SPG_1962 | comGG/cglG | 1860809..1861222 (-) | 414 | ACF54761.1 | conserved hypothetical protein | Machinery gene |
| SPG_1963 | comGF/cglF | 1861200..1861661 (-) | 462 | ACF55334.1 | conserved hypothetical protein | Machinery gene |
| SPG_1964 | comGE/cglE | 1861624..1861926 (-) | 303 | ACF56096.1 | hypothetical protein | Machinery gene |
| SPG_1965 | comGD/cglD | 1861889..1862293 (-) | 405 | ACF56539.1 | competence protein CglD | Machinery gene |
| SPG_1966 | comGC/cglC | 1862286..1862612 (-) | 327 | ACF55098.1 | competence protein CglC | Machinery gene |
| SPG_1967 | comGB/cglB | 1862614..1863630 (-) | 1017 | ACF55582.1 | competence protein CglB | Machinery gene |
| SPG_1968 | comGA/cglA/cilD | 1863578..1864519 (-) | 942 | ACF55208.1 | competence protein CglA | Machinery gene |
| SPG_1969 | - | 1864595..1864960 (-) | 366 | ACF55572.1 | conserved hypothetical protein | - |
| SPG_1970 | - | 1865111..1866169 (-) | 1059 | ACF56524.1 | alcohol dehydrogenase, zinc-containing | - |
| SPG_1971 | nagA | 1866332..1867483 (-) | 1152 | ACF55866.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12208.39 Da Isoelectric Point: 10.0305
>NTDB_id=20236 SPG_1966 ACF55098.1 1862286..1862612(-) (comGC/cglC) [Streptococcus pneumoniae G54]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKE
DGRITEEQAKAYKEYNDKNVGANRKVND
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKE
DGRITEEQAKAYKEYNDKNVGANRKVND
Nucleotide
Download Length: 327 bp
>NTDB_id=20236 SPG_1966 ACF55098.1 1862286..1862612(-) (comGC/cglC) [Streptococcus pneumoniae G54]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAA
GATGGACGCATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACAATGATAAAAATGTGGGAGCAAATCGTAAAGTCAA
TGATTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAA
GATGGACGCATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACAATGATAAAAATGTGGGAGCAAATCGTAAAGTCAA
TGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus pneumoniae D39 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus pneumoniae R6 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus mitis SK321 |
92.593 |
100 |
0.926 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
93.878 |
90.741 |
0.852 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
71.875 |
88.889 |
0.639 |
| comYC | Streptococcus mutans UA159 |
62.745 |
94.444 |
0.593 |
| comYC | Streptococcus mutans UA140 |
62.745 |
94.444 |
0.593 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.902 |
94.444 |
0.519 |
| comYC | Streptococcus suis isolate S10 |
67.901 |
75 |
0.509 |
| comGC | Staphylococcus aureus MW2 |
48.837 |
79.63 |
0.389 |
| comGC | Staphylococcus aureus N315 |
48.837 |
79.63 |
0.389 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
45.349 |
79.63 |
0.361 |