Detailed information NTG0020084

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: SSU05_0654
• Genome accession: CP000407
• Coordinates: 636229..638511 (+)
• Length: 760 a.a.
• NCBI ID: ABP89620.1
• Uniprot ID: -
• Organism: Streptococcus suis 05ZYH33
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 631229..643511

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU05_0649	-	631342..632172 (-)	831	ABP89614.1	ABC-type Fe3+-hydroxamate transport system, periplasmic component	-
SSU05_0648	-	632153..632302 (+)	150	ABP89615.1	hypothetical protein	-
SSU05_0650	-	632284..632883 (-)	600	ABP89616.1	ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component	-
SSU05_0651	-	633222..634667 (-)	1446	ABP89617.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-- lysine ligase (UDP-MurNac-tripeptide synthetase)	-
SSU05_0652	-	634798..635565 (+)	768	ABP89618.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
SSU05_0653	-	635628..636290 (+)	663	ABP89619.1	DNA uptake protein and related DNA-binding proteins	-
SSU05_0654	comEC/celB	636229..638511 (+)	2283	ABP89620.1	Predicted membrane metal-binding protein	Machinery gene
SSU05_0655	-	638836..639204 (+)	369	ABP89621.1	hypothetical protein	-
SSU05_0656	-	639214..639495 (+)	282	ABP89622.1	CBS domain protein	-
SSU05_0657	-	639590..640417 (+)	828	ABP89623.1	hypothetical protein	-
SSU05_0658	-	640423..641694 (+)	1272	ABP89624.1	Uncharacterized protein involved in tellurite resistance	-
SSU05_0659	-	641731..642069 (-)	339	ABP89625.1	Uncharacterized conserved protein	-
SSU05_0660	-	642176..642667 (-)	492	ABP89626.1	Uncharacterized conserved protein	-
SSU05_0661	-	642743..643411 (+)	669	ABP89627.1	Thymidylate kinase	-

Sequence

Protein

• Length: 760 a.a.
• Molecular weight: 85713.06 Da
• Isoelectric Point: 8.4989

>NTDB_id=20084 SSU05_0654 ABP89620.1 636229..638511(+) (comEC/celB) [Streptococcus suis 05ZYH33]
MFRALATRPWKAFGLMSRLSKLPCQPVHLAVLAVAAYFAVHSFSLLTMCLLSLVLAVFGVRQGKTVFLKTLPLLTLCGLF
FGCQKVQWERAAQSAPEQVTTVQVIPDTIDINGDSLSFRGRADGQNYQVFYKLTSQEEQTYFQNLADLVQLEVEAEVSLP
AGQRNFKGFDYQAYLKTQGIYRTVKLTAIKKIVPVQSWNVFDWLSTWRRQALVYVKTNFPAPMSHYMTGLLFGELDSDFD
QMSDLYSSLGIIHLFALSGMQVGFFIDKFRWILLRLGLTKETVDKLQIPFSLVYAGLTGFSVSVVRSLVQKILGNLGLRK
LDNFAVTVFICLLILPRFLLTAGGVLTFTYAFLLTVFDFEDLGQVKKAAVESLSISLGILPVLMTYFYAFQPLSILLTFV
FSFVFDVLLLPGLSVIFLLSPVVKMTWVNGFFVFMEKIIVWVADLGLRPWILGKPSELVLLLLLVSLFLLYDFHRRKKWL
LGLSLVLALLFFITKHPLENEVTVLDIGQGDSIFLRDMRGRTVLIDVGGRVDFAAKEAWQERSRQANAERTLIPYLHSRG
VDRIDSLVLTHTDTDHVGDVLEVAKQVQIGRIVVSPGSLTVPDFVATLKKINVPVHVVKVGDRLPIFDSYLEVLYPDGTG
DGGNNDSIVLYGRLLETNFLFTGDLEQGELDLIETYPNLPVDVLKAGHHGSKGSSYPEFLDHIGAKIALVSAGENNRYKH
PHQETLERFDSRNIQVYRTDQQGAIRFRGWKEWKIETVRR

Nucleotide

• Length: 2283 bp

>NTDB_id=20084 SSU05_0654 ABP89620.1 636229..638511(+) (comEC/celB) [Streptococcus suis 05ZYH33]
ATGTTTCGGGCATTGGCGACAAGACCATGGAAAGCATTCGGCCTTATGTCACGGTTGAGTAAGCTCCCCTGCCAGCCCGT
TCACCTGGCAGTCTTGGCGGTGGCAGCTTACTTTGCAGTCCACTCTTTTTCCCTCTTGACAATGTGCCTGCTCAGCTTGG
TGTTAGCTGTCTTTGGTGTTCGGCAAGGTAAGACAGTTTTCCTCAAAACGCTGCCGCTTCTAACCCTGTGTGGTCTCTTT
TTCGGATGCCAAAAGGTCCAATGGGAGCGGGCAGCTCAGTCAGCCCCAGAGCAAGTGACGACTGTGCAGGTCATTCCAGA
TACCATAGACATCAATGGCGACAGCTTGTCTTTTCGTGGTCGGGCTGATGGACAAAACTATCAGGTTTTCTACAAATTAA
CCAGTCAGGAGGAGCAGACCTATTTTCAAAATCTGGCAGACCTGGTCCAGCTAGAAGTGGAAGCAGAGGTCAGCCTGCCA
GCTGGTCAGCGGAATTTCAAGGGCTTTGACTATCAGGCCTATCTGAAAACACAGGGCATCTATCGGACTGTCAAGCTAAC
GGCGATTAAGAAGATTGTCCCTGTCCAGTCTTGGAATGTTTTTGACTGGCTGTCAACTTGGCGGAGGCAGGCCTTGGTCT
ATGTCAAAACCAATTTTCCGGCTCCCATGAGTCACTACATGACAGGGCTTTTGTTTGGGGAGCTGGATAGTGATTTTGAC
CAGATGAGTGACCTCTATTCCAGTCTAGGAATCATTCATCTCTTTGCCCTGTCTGGTATGCAGGTGGGCTTTTTCATCGA
CAAGTTTCGTTGGATTTTGTTGCGTCTGGGCTTGACCAAGGAAACAGTGGATAAGTTACAAATTCCCTTTTCCCTTGTCT
ATGCTGGTTTGACAGGCTTTTCTGTGTCGGTGGTGCGGTCCTTGGTCCAAAAAATTCTGGGTAATCTAGGCTTGCGGAAG
TTGGATAATTTTGCGGTGACGGTCTTTATCTGTCTGTTGATACTGCCCCGATTTTTACTGACAGCAGGAGGAGTGCTGAC
TTTTACTTATGCTTTCTTGCTGACGGTCTTTGATTTTGAGGATTTGGGGCAGGTCAAAAAGGCTGCGGTGGAGAGCCTCA
GTATTTCACTGGGAATTTTGCCGGTGCTTATGACCTATTTCTATGCCTTTCAGCCTCTATCTATCCTCTTGACCTTTGTC
TTTTCCTTTGTCTTTGATGTCCTACTCTTGCCAGGTTTGTCAGTCATTTTTCTCCTGTCGCCAGTTGTCAAGATGACTTG
GGTCAACGGATTTTTCGTCTTTATGGAGAAAATCATTGTCTGGGTGGCTGATTTGGGATTGCGGCCTTGGATACTGGGCA
AGCCGTCTGAGCTGGTCCTCTTGCTTTTGCTGGTCAGCCTCTTCTTGCTCTACGATTTCCACAGGAGAAAGAAATGGCTT
CTAGGACTGAGCTTGGTCCTCGCTCTGCTATTTTTCATCACCAAACACCCGCTGGAAAATGAGGTGACGGTGCTGGACAT
CGGGCAGGGGGACAGCATCTTTTTGCGGGATATGCGGGGGCGGACGGTTCTGATTGATGTAGGCGGACGAGTCGATTTCG
CGGCCAAGGAAGCGTGGCAGGAGCGGTCTCGGCAGGCAAATGCAGAGCGGACTTTGATTCCCTATCTGCATAGTCGGGGT
GTGGATAGGATTGATAGTTTAGTCCTGACCCACACCGACACAGACCATGTGGGGGATGTGCTGGAAGTGGCGAAGCAGGT
CCAGATTGGTCGGATTGTCGTGTCGCCGGGAAGTCTGACGGTGCCTGACTTTGTAGCGACCTTGAAAAAAATCAATGTTC
CTGTCCATGTGGTAAAAGTGGGCGACCGCCTACCAATTTTTGACTCCTATCTGGAGGTCCTCTATCCAGACGGGACAGGC
GACGGTGGCAATAATGACTCCATTGTCCTTTACGGTCGCTTGTTGGAAACTAACTTTCTCTTTACAGGAGACCTGGAGCA
AGGGGAGTTGGACTTGATAGAAACCTATCCCAACCTGCCTGTCGATGTCCTCAAAGCCGGTCACCATGGCTCCAAAGGCT
CTTCTTATCCTGAATTTTTAGACCATATCGGTGCCAAGATTGCCTTGGTATCTGCTGGAGAAAACAACCGCTACAAGCAT
CCTCACCAAGAAACCTTGGAACGATTTGACAGCCGGAATATCCAAGTCTATCGCACAGACCAGCAAGGAGCCATTCGCTT
CCGAGGTTGGAAGGAGTGGAAGATTGAGACGGTGAGGAGGTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (45-190)

• Competence protein (Competence) (230-476)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-713)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	53.774	97.632	0.525
comEC/celB	Streptococcus mitis NCTC 12261	52.782	96.974	0.512
comEC/celB	Streptococcus pneumoniae TIGR4	51.973	96.711	0.503
comEC/celB	Streptococcus pneumoniae Rx1	51.701	96.711	0.5
comEC/celB	Streptococcus pneumoniae D39	51.701	96.711	0.5
comEC/celB	Streptococcus pneumoniae R6	51.701	96.711	0.5
comEC	Lactococcus lactis subsp. cremoris KW2	49.399	98.553	0.487