Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | BJD94_RS14070 | Genome accession | NZ_CP017635 |
| Coordinates | 2785667..2786257 (+) | Length | 196 a.a. |
| NCBI ID | WP_011079354.1 | Uniprot ID | A0A3Q0L3M6 |
| Organism | Vibrio vulnificus Env1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2780667..2791257
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJD94_RS14055 (BJD94_12775) | - | 2781434..2783947 (-) | 2514 | WP_017419655.1 | penicillin-binding protein 1A | - |
| BJD94_RS14060 (BJD94_12780) | pilM | 2784087..2785094 (+) | 1008 | WP_103155248.1 | type IV pilus assembly protein PilM | Machinery gene |
| BJD94_RS14065 (BJD94_12785) | pilN | 2785084..2785674 (+) | 591 | WP_038940289.1 | PilN domain-containing protein | Machinery gene |
| BJD94_RS14070 (BJD94_12790) | pilO | 2785667..2786257 (+) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BJD94_RS14075 (BJD94_12795) | pilP | 2786247..2786759 (+) | 513 | WP_038940290.1 | pilus assembly protein PilP | Machinery gene |
| BJD94_RS14080 (BJD94_12800) | pilQ | 2786773..2788557 (+) | 1785 | WP_017419660.1 | type IV pilus secretin PilQ | Machinery gene |
| BJD94_RS14085 (BJD94_12805) | aroK | 2788759..2789277 (+) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| BJD94_RS14090 (BJD94_12810) | aroB | 2789310..2790401 (+) | 1092 | WP_038964151.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22749.25 Da Isoelectric Point: 5.0836
>NTDB_id=200824 BJD94_RS14070 WP_011079354.1 2785667..2786257(+) (pilO) [Vibrio vulnificus Env1]
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
Nucleotide
Download Length: 591 bp
>NTDB_id=200824 BJD94_RS14070 WP_011079354.1 2785667..2786257(+) (pilO) [Vibrio vulnificus Env1]
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAAGAGTTGGCGACGATGCTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
ATGGCTAGTTGGCAAGATCTCGATATCGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAAGAGTTGGCGACGATGCTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
73.016 |
96.429 |
0.704 |
| pilO | Vibrio cholerae strain A1552 |
67.347 |
100 |
0.673 |