Detailed information NTG0020081

Bioinformatically predicted

Overview

• Name: comFC/cflB
• Type: Machinery gene
• Locus tag: SSU05_0438
• Genome accession: CP000407
• Coordinates: 419127..419792 (+)
• Length: 221 a.a.
• NCBI ID: ABP89405.1
• Uniprot ID: -
• Organism: Streptococcus suis 05ZYH33
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 414127..424792

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU05_0433	-	414338..415738 (+)	1401	ABP89400.1	Predicted hydrolase of the HAD superfamily	-
SSU05_0434	-	415740..416111 (+)	372	ABP89401.1	Predicted RNA binding protein (contains ribosomal protein S1 domain)	-
SSU05_0435	-	416137..417111 (-)	975	ABP89402.1	O-acetylserine lyase	-
SSU05_0436	-	417153..417791 (-)	639	ABP89403.1	Uncharacterized conserved protein	-
SSU05_0437	comFA/cflA	417839..419134 (+)	1296	ABP89404.1	Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)	Machinery gene
SSU05_0438	comFC/cflB	419127..419792 (+)	666	ABP89405.1	Predicted amidophosphoribosyltransferase	Machinery gene
SSU05_0439	-	419833..420411 (+)	579	ABP89406.1	Ribosome-associated protein Y (PSrp-1)	-

Sequence

Protein

• Length: 221 a.a.
• Molecular weight: 25748.55 Da
• Isoelectric Point: 8.2726

>NTDB_id=20081 SSU05_0438 ABP89405.1 419127..419792(+) (comFC/cflB) [Streptococcus suis 05ZYH33]
MSNCLLCGQAMKNKTRFSDLIFFSKEKSGICEECFSTFEEIAEQHCPHCYKNGESESCKDCQYWQNQGKPVVHTALYQYN
QAMAHYFSRYKFQGDYVLRNIFAKKLRIALSQFPDYTIVPIPISQKRLSERGFNQVEGLLDATNIPYQSLLGKYESQKQS
SKNRAERLEAKQMFYLLDEKEVPEKILLFDDIYTTGATIQLAVELFMKIGRKEIKTFSLTR

Nucleotide

• Length: 666 bp

>NTDB_id=20081 SSU05_0438 ABP89405.1 419127..419792(+) (comFC/cflB) [Streptococcus suis 05ZYH33]
ATGTCTAATTGCCTATTGTGCGGTCAAGCTATGAAAAATAAAACAAGATTTTCAGATCTCATCTTCTTTAGTAAAGAAAA
ATCGGGCATCTGTGAAGAATGTTTTTCGACTTTTGAGGAAATAGCAGAGCAACACTGTCCACATTGTTATAAAAATGGGG
AATCGGAAAGTTGCAAGGATTGTCAGTACTGGCAGAATCAAGGGAAACCAGTTGTCCACACAGCTTTGTACCAATATAAT
CAAGCGATGGCGCATTATTTTAGTCGCTACAAATTTCAAGGAGACTATGTTTTAAGAAATATTTTTGCTAAAAAGCTTAG
AATAGCGTTAAGCCAATTTCCTGACTACACAATTGTTCCCATACCAATTAGTCAAAAACGACTATCAGAACGCGGTTTTA
ATCAAGTGGAAGGACTTTTGGATGCTACAAATATTCCCTATCAGTCCCTTCTTGGAAAGTATGAAAGCCAAAAACAATCA
TCTAAAAATCGTGCAGAGAGACTAGAAGCAAAACAGATGTTCTATCTATTAGATGAAAAAGAAGTGCCAGAAAAAATATT
ATTATTCGACGATATATATACAACAGGAGCCACAATCCAACTTGCTGTAGAACTTTTCATGAAAATTGGTAGGAAAGAAA
TCAAAACATTTTCACTAACACGATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC/cflB	Streptococcus mitis SK321	49.083	98.643	0.484
comFC/cflB	Streptococcus pneumoniae TIGR4	49.083	98.643	0.484
comFC/cflB	Streptococcus pneumoniae Rx1	49.083	98.643	0.484
comFC/cflB	Streptococcus pneumoniae D39	49.083	98.643	0.484
comFC/cflB	Streptococcus pneumoniae R6	49.083	98.643	0.484
comFC/cflB	Streptococcus mitis NCTC 12261	49.083	98.643	0.484