Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BJP34_RS34565 | Genome accession | NZ_CP017599 |
| Coordinates | 9420343..9420708 (-) | Length | 121 a.a. |
| NCBI ID | WP_070396243.1 | Uniprot ID | - |
| Organism | Moorena producens PAL-8-15-08-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 9415343..9425708
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJP34_RS34550 (BJP34_34555) | - | 9415851..9416633 (-) | 783 | WP_070396240.1 | MlaE family lipid ABC transporter permease subunit | - |
| BJP34_RS34555 (BJP34_34560) | - | 9416641..9419700 (-) | 3060 | WP_070396241.1 | methyl-accepting chemotaxis protein | - |
| BJP34_RS34560 (BJP34_34565) | - | 9419791..9420321 (-) | 531 | WP_070396242.1 | chemotaxis protein CheW | - |
| BJP34_RS34565 (BJP34_34570) | pilH | 9420343..9420708 (-) | 366 | WP_070396243.1 | response regulator transcription factor | Machinery gene |
| BJP34_RS34570 (BJP34_34575) | - | 9421008..9422216 (-) | 1209 | WP_070396244.1 | response regulator | - |
| BJP34_RS34575 (BJP34_34580) | hmpF | 9422992..9424755 (+) | 1764 | WP_070396245.1 | pilus motility taxis protein HmpF | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13613.85 Da Isoelectric Point: 5.8849
>NTDB_id=200618 BJP34_RS34565 WP_070396243.1 9420343..9420708(-) (pilH) [Moorena producens PAL-8-15-08-1]
MSKVLVVEDSLAQRQMISDLLKGSGLKVDVASDGVEALEHILEYCPDVVVLDIVMPRMNGYEVCRRLKADPKTQNVPVVM
CSSKGEEFDRYWGMRQGADAYIAKPFQPTELIGTVRQLLRR
MSKVLVVEDSLAQRQMISDLLKGSGLKVDVASDGVEALEHILEYCPDVVVLDIVMPRMNGYEVCRRLKADPKTQNVPVVM
CSSKGEEFDRYWGMRQGADAYIAKPFQPTELIGTVRQLLRR
Nucleotide
Download Length: 366 bp
>NTDB_id=200618 BJP34_RS34565 WP_070396243.1 9420343..9420708(-) (pilH) [Moorena producens PAL-8-15-08-1]
ATGAGTAAAGTTTTAGTTGTAGAAGACAGCCTTGCTCAACGGCAGATGATCTCAGACCTCCTCAAAGGTAGTGGTTTGAA
GGTGGATGTTGCCAGTGATGGTGTTGAGGCTTTAGAACATATTTTAGAGTATTGTCCAGATGTAGTTGTCTTGGATATAG
TGATGCCACGCATGAATGGCTATGAGGTCTGTCGGCGTCTTAAGGCTGACCCCAAAACTCAGAATGTGCCAGTGGTGATG
TGTTCTTCAAAAGGCGAAGAATTCGACCGCTATTGGGGCATGAGGCAAGGTGCAGATGCATACATTGCGAAGCCTTTTCA
GCCAACGGAGTTGATTGGAACAGTTAGACAGCTACTGAGAAGATAA
ATGAGTAAAGTTTTAGTTGTAGAAGACAGCCTTGCTCAACGGCAGATGATCTCAGACCTCCTCAAAGGTAGTGGTTTGAA
GGTGGATGTTGCCAGTGATGGTGTTGAGGCTTTAGAACATATTTTAGAGTATTGTCCAGATGTAGTTGTCTTGGATATAG
TGATGCCACGCATGAATGGCTATGAGGTCTGTCGGCGTCTTAAGGCTGACCCCAAAACTCAGAATGTGCCAGTGGTGATG
TGTTCTTCAAAAGGCGAAGAATTCGACCGCTATTGGGGCATGAGGCAAGGTGCAGATGCATACATTGCGAAGCCTTTTCA
GCCAACGGAGTTGATTGGAACAGTTAGACAGCTACTGAGAAGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
73.554 |
100 |
0.736 |
| pilG | Acinetobacter baumannii strain A118 |
43.478 |
95.041 |
0.413 |
| micA | Streptococcus pneumoniae Cp1015 |
38.843 |
100 |
0.388 |
| vicR | Streptococcus mutans UA159 |
38.017 |
100 |
0.38 |
| covR | Streptococcus salivarius strain HSISS4 |
37.705 |
100 |
0.38 |