Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SDD27957_01660 Genome accession   CM001076
Coordinates   333856..334617 (+) Length   253 a.a.
NCBI ID   EFY02016.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 328856..339617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDD27957_01645 - 329114..330682 (-) 1569 EFY02013.1 putative glutamine-binding periplasmic protein -
  SDD27957_01650 - 330881..332806 (+) 1926 EFY02014.1 hypothetical protein -
  SDD27957_01655 - 332873..333712 (+) 840 EFY02015.1 undecaprenyl pyrophosphate phosphatase -
  SDD27957_01660 mecA 333856..334617 (+) 762 EFY02016.1 adaptor protein Regulator
  SDD27957_01665 - 334624..335793 (+) 1170 EFY02017.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase -
  SDD27957_01670 - 335906..336676 (+) 771 EFY02018.1 Iron-sulfur cluster assembly ATPase protein SufC -
  SDD27957_01675 - 336773..338035 (+) 1263 EFY02019.1 SufD protein -
  SDD27957_01680 - 338066..339292 (+) 1227 EFY02020.1 Cysteine desulfurase -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29155.80 Da        Isoelectric Point: 4.0916

>NTDB_id=20019 SDD27957_01660 EFY02016.1 333856..334617(+) (mecA) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MEMKQISETTLKITISMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFVTKSEL
NKDLNLEDLADLGDISQMTPEDFFKSLEQSMREKGDVNAHEKLEKIEEMMEDVVEATLVSQTEETAEEAEQEPEPLDYVH
YVLDFATLSEAVAFSRTIDFPVEASELYKGDSRYHMTILLDVQQQPSYFANVMYARLIEHASPGTKTRAYLQEHGVQLIL
DGAVEQLRKIELG

Nucleotide


Download         Length: 762 bp        

>NTDB_id=20019 SDD27957_01660 EFY02016.1 333856..334617(+) (mecA) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGGAAATGAAACAAATTAGTGAGACAACGCTAAAAATAACAATTAGTATGGATGATTTAGAAGAAAGAGGGATGGAATT
AAAAGATTTTCTCATTCCTCAAGAAAAAACGGAAGAGTTCTTCTACTCTGTCATGGATGAGTTGGATCTACCAGACAATT
TCAAAGATAGTGGCATGCTTAGCTTTCGTGTGACCCCTAGAAAAGATCGTTTGGATGTCTTTGTAACCAAGTCTGAACTC
AATAAGGACCTTAATCTTGAGGATTTAGCTGATTTGGGAGACATCTCTCAAATGACTCCTGAAGACTTTTTCAAGAGCTT
AGAACAATCTATGCGAGAAAAAGGGGATGTAAATGCCCATGAGAAACTGGAAAAAATTGAAGAAATGATGGAAGACGTTG
TTGAAGCAACTCTAGTTAGTCAAACGGAAGAGACCGCTGAGGAAGCGGAACAAGAACCAGAGCCGTTAGATTACGTGCAT
TATGTTTTGGACTTTGCAACACTTTCAGAGGCCGTCGCTTTTTCTCGGACAATTGATTTTCCTGTTGAAGCTTCAGAATT
GTATAAAGGTGACAGCCGTTATCATATGACGATTTTATTAGATGTTCAGCAACAACCATCTTATTTTGCCAATGTGATGT
ATGCAAGACTGATTGAGCATGCTAGTCCTGGAACAAAAACAAGAGCTTACTTACAAGAGCATGGCGTACAATTAATTCTG
GATGGAGCTGTTGAGCAATTACGAAAGATTGAGTTGGGATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-247)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

64.4

98.814

0.636
  mecA Streptococcus thermophilus LMD-9

57.028

98.419

0.561
  mecA Streptococcus thermophilus LMG 18311

56.225

98.419

0.553
  mecA Streptococcus pneumoniae Rx1

47.843

100

0.482
  mecA Streptococcus pneumoniae D39

47.843

100

0.482
  mecA Streptococcus pneumoniae R6

47.843

100

0.482
  mecA Streptococcus pneumoniae TIGR4

47.843

100

0.482

Multiple sequence alignment