Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG544_RS11140 | Genome accession | NZ_CP017526 |
| Coordinates | 2213141..2213479 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 1567 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2208141..2218479
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG544_RS11115 (BG544_10820) | rpsL | 2208383..2208757 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG544_RS11120 (BG544_10825) | rfaC | 2208878..2209837 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG544_RS11125 (BG544_10830) | waaF | 2209905..2210942 (-) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| BG544_RS11130 (BG544_10835) | - | 2211053..2211469 (-) | 417 | WP_020824267.1 | MliC family protein | - |
| BG544_RS11135 (BG544_10840) | - | 2211529..2212848 (-) | 1320 | WP_006251645.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG544_RS11140 (BG544_10845) | comEA/comE1 | 2213141..2213479 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG544_RS11145 (BG544_10850) | asd | 2213644..2214537 (+) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG544_RS11150 (BG544_10855) | hsdR | 2214609..2216960 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG544_RS11155 (BG544_10860) | - | 2217008..2218477 (+) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199726 BG544_RS11140 WP_006251644.1 2213141..2213479(+) (comEA/comE1) [Mannheimia haemolytica strain 1567]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199726 BG544_RS11140 WP_006251644.1 2213141..2213479(+) (comEA/comE1) [Mannheimia haemolytica strain 1567]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |