Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   CD200_RS10925 Genome accession   NZ_CP021970
Coordinates   2117787..2119610 (+) Length   607 a.a.
NCBI ID   WP_061565883.1    Uniprot ID   -
Organism   Bacillus licheniformis strain CBA7132     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2112787..2124610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD200_RS10910 (CD200_10940) - 2113879..2115453 (+) 1575 WP_016885411.1 alkaline phosphatase family protein -
  CD200_RS10915 (CD200_10945) - 2115593..2116066 (+) 474 WP_009328118.1 MarR family transcriptional regulator -
  CD200_RS10920 (CD200_10950) rcrP 2116063..2117790 (+) 1728 WP_061565882.1 ABC transporter ATP-binding protein Regulator
  CD200_RS10925 (CD200_10955) rcrQ 2117787..2119610 (+) 1824 WP_061565883.1 ABC transporter ATP-binding protein Regulator
  CD200_RS10930 (CD200_10960) - 2119844..2121058 (+) 1215 WP_003182494.1 cytochrome P450 -
  CD200_RS10935 (CD200_10965) - 2121107..2121823 (-) 717 WP_003182496.1 3-ketoacyl-ACP reductase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67262.62 Da        Isoelectric Point: 6.7496

>NTDB_id=198698 CD200_RS10925 WP_061565883.1 2117787..2119610(+) (rcrQ) [Bacillus licheniformis strain CBA7132]
MSQQPKHHGSIPKGMHKTKPKEFKKTLLRLARYLKPRTFQLVLVVFAAILATLFNVISPKLLGDATSSLFASFTEGTGVQ
FGFLGRITLILAGLYLLSALFTFLQHYLMAGVAQKTIYEMRQEVNEKLTRLPLKYYDKHSHGDTLSRAVNDIDNINTSLQ
QALTQMITSVITIVGIIVMMLLISPVLTLVVFITVPLSMLAVRFIASFSQKHFAAQQKELGDINGHVEEMFTGHQEVKAF
GHEEKAIQQFDEVNERLYQSGWKAQFISGLMMPMMTFIGNLGYVFVSITGGIFVLNGTLLIGGVQAFIQYTQQFSQPLVQ
AAGIANTIQSAIASAERVFSLLDEEEETGETPASIDTGKLKGDVSFEHVAFGYDKNVPVIRDLSLHAKEGQTIAIVGPTG
AGKTTIINLLMRFYELNKGSIKVGGTDISELSREQARSMFAMVLQDTWLFNGTIRENIAYGREGATEEDIIRAAKGAYAD
DFIRTLPDGYDTVLGEDAQNISQGQRQLLTIARAILADPKILILDEATSSVDTRTEMNIQKAMNKLMANRTSFVIAHRLS
TIKDADMILVMKNGDIIEKGSHEELLRKNGFYADLYNSQFSREEAVS

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=198698 CD200_RS10925 WP_061565883.1 2117787..2119610(+) (rcrQ) [Bacillus licheniformis strain CBA7132]
ATGAGCCAACAACCAAAGCATCACGGCTCTATACCCAAAGGAATGCACAAGACAAAACCGAAAGAATTTAAAAAGACCCT
TTTGAGATTGGCCCGCTATTTAAAACCGCGGACCTTCCAGCTGGTGCTCGTTGTCTTCGCTGCAATATTGGCGACATTAT
TTAATGTCATCAGTCCAAAACTTCTCGGGGACGCGACCTCTTCCCTTTTCGCAAGCTTTACAGAAGGCACCGGTGTTCAA
TTCGGCTTTCTCGGCCGGATCACGCTGATCCTGGCAGGATTGTATCTGCTTTCTGCTTTGTTTACGTTCTTGCAGCATTA
CCTGATGGCCGGCGTAGCCCAGAAAACGATATACGAAATGCGCCAGGAAGTGAATGAAAAGCTGACGCGGCTCCCTTTAA
AGTACTATGACAAGCATTCGCACGGCGACACGCTCAGCCGCGCCGTCAATGATATCGACAATATCAATACGTCATTGCAG
CAGGCGCTGACGCAAATGATTACGTCTGTCATTACAATAGTCGGAATCATCGTCATGATGCTTTTGATCAGCCCTGTGCT
GACGCTCGTCGTCTTCATCACGGTCCCGCTCAGCATGCTGGCCGTCCGATTCATTGCCTCATTTTCGCAGAAACACTTCG
CCGCGCAGCAAAAAGAACTCGGCGACATCAACGGACACGTTGAAGAAATGTTTACGGGGCATCAGGAAGTAAAGGCATTC
GGGCATGAAGAAAAAGCGATTCAGCAATTCGATGAAGTAAATGAGCGTCTTTACCAGTCAGGCTGGAAAGCGCAGTTTAT
TTCCGGTCTGATGATGCCGATGATGACATTCATCGGCAACCTCGGCTATGTGTTTGTCAGCATAACCGGCGGTATTTTCG
TTCTTAACGGCACCCTTTTGATCGGAGGCGTGCAGGCTTTTATCCAATATACGCAGCAATTTTCCCAGCCGCTCGTTCAA
GCTGCCGGAATCGCGAATACAATCCAATCGGCAATCGCATCCGCCGAAAGGGTGTTCAGTCTTTTGGACGAAGAAGAAGA
AACCGGGGAGACGCCGGCTTCCATCGATACCGGCAAATTAAAAGGCGATGTATCGTTTGAACATGTCGCCTTCGGTTATG
ATAAAAACGTTCCGGTCATCCGCGACTTAAGCCTTCACGCCAAAGAAGGCCAGACGATTGCGATCGTCGGACCGACCGGC
GCTGGAAAAACGACGATCATCAATTTGCTGATGCGTTTTTATGAACTAAACAAAGGCAGCATCAAGGTCGGCGGCACAGA
TATCAGCGAGCTGTCGCGCGAACAGGCGAGAAGCATGTTTGCGATGGTGTTACAGGACACATGGCTGTTCAACGGCACCA
TCCGGGAAAACATCGCTTACGGGCGTGAAGGCGCGACCGAAGAAGACATCATCAGAGCGGCAAAAGGCGCCTATGCCGAC
GATTTTATCCGCACCTTGCCGGACGGCTATGATACGGTACTTGGCGAAGATGCCCAAAACATCTCGCAAGGGCAACGGCA
GCTCTTAACGATCGCGAGAGCCATTTTAGCTGATCCGAAGATTTTAATATTAGATGAAGCGACAAGCAGTGTCGACACCC
GGACGGAAATGAATATTCAAAAAGCGATGAACAAACTGATGGCCAACCGTACGAGCTTTGTTATCGCCCACCGTCTTTCT
ACCATTAAAGATGCCGACATGATTCTTGTGATGAAAAACGGAGATATTATTGAAAAAGGCAGCCACGAAGAGCTGCTCCG
CAAGAACGGATTTTATGCCGATTTGTATAACAGCCAGTTCTCCCGGGAAGAAGCCGTCAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(381-529)

ABC transporter transmembrane region (ABC_membrane)

(42-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

46.838

96.376

0.451

Multiple sequence alignment