Detailed information NTG0197837

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: BIZ33_RS01670
• Genome accession: NZ_CP017374
• Coordinates: 361064..363214 (+)
• Length: 716 a.a.
• NCBI ID: WP_085775816.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain TMW 1.708
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 356064..368214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BIZ33_RS01640 (BIZ33_01605)	-	356153..357337 (+)	1185	WP_085775815.1	cation:proton antiporter	-
BIZ33_RS01645 (BIZ33_01610)	-	357744..358667 (+)	924	WP_004271307.1	IS30 family transposase	-
BIZ33_RS01650 (BIZ33_01615)	-	358700..359266 (+)	567	WP_262344037.1	response regulator transcription factor	-
BIZ33_RS15955	-	359572..360072 (-)	501	WP_225868584.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ33_RS01660 (BIZ33_01625)	plnF	360444..360602 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
BIZ33_RS01665 (BIZ33_01630)	plnE	360627..360797 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
BIZ33_RS01670 (BIZ33_01635)	comA	361064..363214 (+)	2151	WP_085775816.1	peptide cleavage/export ABC transporter	Regulator
BIZ33_RS01675 (BIZ33_01640)	-	363230..364606 (+)	1377	WP_062688861.1	HlyD family secretion protein	-
BIZ33_RS15960	-	364696..364869 (+)	174	WP_234369350.1	hypothetical protein	-
BIZ33_RS01680 (BIZ33_01645)	-	364915..365385 (+)	471	WP_232539265.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ33_RS01685 (BIZ33_01650)	-	365453..366121 (+)	669	WP_027821499.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ33_RS01690 (BIZ33_01655)	-	366208..366888 (+)	681	WP_053339247.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ33_RS01695 (BIZ33_01660)	-	366982..367668 (+)	687	WP_027821497.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ33_RS01700 (BIZ33_01665)	-	367806..368009 (+)	204	WP_027821496.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 80002.74 Da
• Isoelectric Point: 6.6531

>NTDB_id=197837 BIZ33_RS01670 WP_085775816.1 361064..363214(+) (comA) [Lactiplantibacillus plantarum strain TMW 1.708]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVFAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVGIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSMLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=197837 BIZ33_RS01670 WP_085775816.1 361064..363214(+) (comA) [Lactiplantibacillus plantarum strain TMW 1.708]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACACATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGTTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGGCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCATGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.626	99.581	0.584
comA	Streptococcus pneumoniae Rx1	58.345	99.581	0.581
comA	Streptococcus pneumoniae D39	58.345	99.581	0.581
comA	Streptococcus pneumoniae R6	58.345	99.581	0.581
comA	Streptococcus pneumoniae TIGR4	58.205	99.581	0.58
comA	Streptococcus mitis SK321	58.065	99.581	0.578
comA	Streptococcus gordonii str. Challis substr. CH1	56.825	100	0.57
comA/nlmT	Streptococcus mutans UA159	54.457	100	0.546