Detailed information NTG0197809

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: BIZ32_RS01820
• Genome accession: NZ_CP017363
• Coordinates: 374391..376541 (+)
• Length: 716 a.a.
• NCBI ID: WP_085764307.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain TMW 1.277
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 369391..381541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BIZ32_RS01785 (BIZ32_01715)	-	369477..370223 (+)	747	WP_063487605.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ32_RS01790 (BIZ32_01720)	-	370355..370504 (+)	150	WP_003643807.1	hypothetical protein	-
BIZ32_RS01795 (BIZ32_01725)	-	370518..371858 (+)	1341	WP_003643808.1	GHKL domain-containing protein	-
BIZ32_RS01800 (BIZ32_01730)	-	371859..372602 (+)	744	WP_085764305.1	response regulator transcription factor	-
BIZ32_RS01805 (BIZ32_01735)	-	372896..373669 (-)	774	WP_085764306.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ32_RS01810 (BIZ32_01740)	plnF	373771..373929 (-)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
BIZ32_RS01815 (BIZ32_01745)	plnE	373954..374124 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
BIZ32_RS01820 (BIZ32_01750)	comA	374391..376541 (+)	2151	WP_085764307.1	peptide cleavage/export ABC transporter	Regulator
BIZ32_RS01825 (BIZ32_01755)	-	376558..377934 (+)	1377	WP_062688861.1	HlyD family secretion protein	-
BIZ32_RS01830 (BIZ32_01760)	-	378019..378708 (+)	690	WP_085764308.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ32_RS01835 (BIZ32_01765)	-	378775..379443 (+)	669	WP_003641990.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ32_RS01840 (BIZ32_01770)	-	379530..380210 (+)	681	WP_003641991.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ32_RS01845 (BIZ32_01775)	-	380381..380980 (+)	600	WP_262342451.1	CPBP family intramembrane glutamic endopeptidase	-
BIZ32_RS01850 (BIZ32_01780)	-	381118..381321 (+)	204	WP_027821496.1	hypothetical protein	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79996.67 Da
• Isoelectric Point: 6.5571

>NTDB_id=197809 BIZ32_RS01820 WP_085764307.1 374391..376541(+) (comA) [Lactiplantibacillus plantarum strain TMW 1.277]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLDFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVGIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=197809 BIZ32_RS01820 WP_085764307.1 374391..376541(+) (comA) [Lactiplantibacillus plantarum strain TMW 1.277]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGATTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACACATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGGCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTGGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.766	99.581	0.585
comA	Streptococcus pneumoniae D39	58.485	99.581	0.582
comA	Streptococcus pneumoniae R6	58.485	99.581	0.582
comA	Streptococcus pneumoniae Rx1	58.485	99.581	0.582
comA	Streptococcus pneumoniae TIGR4	58.345	99.581	0.581
comA	Streptococcus mitis SK321	58.205	99.581	0.58
comA	Streptococcus gordonii str. Challis substr. CH1	57.103	100	0.573
comA/nlmT	Streptococcus mutans UA159	54.457	100	0.546