Detailed information NTG0197432

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: WH25_RS09260
• Genome accession: NZ_CP017295
• Coordinates: 1928588..1929655 (-)
• Length: 355 a.a.
• NCBI ID: WP_046164589.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain IE35
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1923588..1934655

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WH25_RS09230 (WH25_09230)	-	1924051..1924485 (-)	435	WP_008809618.1	MarR family winged helix-turn-helix transcriptional regulator	-
WH25_RS09235 (WH25_09235)	-	1924624..1925415 (-)	792	WP_046165203.1	enoyl-CoA hydratase	-
WH25_RS09240 (WH25_09240)	-	1925667..1927037 (+)	1371	WP_046165202.1	aspartate kinase	-
WH25_RS09255 (WH25_09255)	amiF	1927654..1928577 (-)	924	WP_046164588.1	ATP-binding cassette domain-containing protein	Regulator
WH25_RS09260 (WH25_09260)	amiE	1928588..1929655 (-)	1068	WP_046164589.1	ABC transporter ATP-binding protein	Regulator
WH25_RS09265 (WH25_09265)	amiD	1929664..1930590 (-)	927	WP_008809623.1	oligopeptide ABC transporter permease OppC	Regulator
WH25_RS09270 (WH25_09270)	amiC	1930590..1932086 (-)	1497	WP_046164590.1	ABC transporter permease	Regulator
WH25_RS09275 (WH25_09275)	amiA	1932151..1934133 (-)	1983	WP_046164591.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39838.64 Da
• Isoelectric Point: 4.8872

>NTDB_id=197432 WH25_RS09260 WP_046164589.1 1928588..1929655(-) (amiE) [Streptococcus gordonii strain IE35]
MIQNKNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRVAQGVINYRGQDL
TTLKSNKDWEKIRGAKIATIFQDPMTSLDPINTIGSQITEVIIKHQGKDAKEAKEMAIDYMKKVGIPDAERRFEEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQNEYRFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEIFYDPRHPYTWSLLSSLPQLANDHGELFSIPGTPPSLYTELKGDAFALRSDYAMQIDFEEKAPQFQVTETHWAK
TWLLHEDAPKVHKPEIIENLHDKIRLNMGFAHLEG

Nucleotide

• Length: 1068 bp

>NTDB_id=197432 WH25_RS09260 WP_046164589.1 1928588..1929655(-) (amiE) [Streptococcus gordonii strain IE35]
ATGATACAAAATAAAAATGTAATATTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGATAAAGTCCTGACAGC
CATTCGAGGTGTATCCCTTGATTTGATTGAAGGAGAAGTGTTAGCTTTGGTAGGAGAATCAGGATCAGGTAAGTCTGTGT
TGACTAAAACATTCACTGGGATGTTGGAAGATAATGGGCGCGTTGCGCAAGGTGTTATTAACTACCGTGGTCAAGATTTG
ACAACTTTAAAATCAAATAAAGATTGGGAAAAAATTCGTGGTGCTAAGATCGCTACGATTTTCCAAGATCCTATGACTAG
TTTGGATCCAATCAATACAATCGGAAGCCAAATTACTGAAGTTATTATCAAACACCAAGGCAAAGATGCAAAAGAAGCCA
AAGAAATGGCAATCGACTATATGAAAAAAGTTGGAATACCTGATGCAGAACGTCGGTTTGAAGAGTATCCTTTCCAATAT
TCTGGAGGAATGCGCCAACGTATTGTTATCGCGATTGCTCTTGCCTGTCGTCCAGATATTCTAATTTGTGATGAGCCAAC
AACAGCTTTGGATGTGACAATTCAAGCACAAATTATCGAACTTCTAAAATCATTGCAGAACGAATACCGCTTTACAACTA
TATTTATCACTCATGACTTGGGTGTTGTTGCTAGCATTGCCGATAAAGTAGCGGTTATGTATGCTGGTGAGATTGTTGAA
TACGGAACGGTTGAAGAAATTTTTTACGATCCACGCCATCCTTATACATGGAGCTTGTTATCTAGCTTGCCACAGTTGGC
CAATGATCATGGTGAACTCTTCTCTATCCCAGGAACTCCTCCGTCTCTTTATACCGAGTTGAAAGGTGATGCCTTTGCTC
TTCGTTCGGATTACGCTATGCAAATTGATTTCGAAGAAAAAGCACCACAATTCCAAGTCACAGAAACTCACTGGGCTAAA
ACTTGGTTGCTTCATGAAGATGCACCAAAGGTTCACAAGCCTGAAATTATTGAAAACTTACATGATAAAATTCGCTTGAA
TATGGGCTTTGCTCATTTAGAAGGCTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	86.969	99.437	0.865
amiE	Streptococcus thermophilus LMG 18311	85.269	99.437	0.848
amiE	Streptococcus thermophilus LMD-9	85.269	99.437	0.848
oppD	Streptococcus mutans UA159	54.155	98.31	0.532