Detailed information NTG0196540

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: BHS00_RS03700
• Genome accession: NZ_CP017194
• Coordinates: 764813..765676 (+)
• Length: 287 a.a.
• NCBI ID: WP_188347555.1
• Uniprot ID: -
• Organism: Lactococcus carnosus strain TMW 2.1612
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 759813..770676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BHS00_RS03675 (BHS00_03650)	lepB	760056..760616 (+)	561	WP_188347553.1	signal peptidase I	-
BHS00_RS03680 (BHS00_03655)	-	760867..762156 (+)	1290	WP_188347554.1	pyrimidine-nucleoside phosphorylase	-
BHS00_RS03685 (BHS00_03660)	deoC	762153..762818 (+)	666	WP_096813715.1	deoxyribose-phosphate aldolase	-
BHS00_RS03690 (BHS00_03665)	-	762802..763194 (+)	393	WP_096813716.1	cytidine deaminase	-
BHS00_RS03695 (BHS00_03670)	-	763317..764760 (+)	1444	Protein_690	IS1182 family transposase	-
BHS00_RS03700 (BHS00_03675)	dprA	764813..765676 (+)	864	WP_188347555.1	DNA-processing protein DprA	Machinery gene
BHS00_RS03705 (BHS00_03680)	purD	765916..767169 (+)	1254	WP_188347556.1	phosphoribosylamine--glycine ligase	-
BHS00_RS03710 (BHS00_03685)	purE	767162..767656 (+)	495	WP_096813719.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
BHS00_RS03715 (BHS00_03690)	purK	767649..768719 (+)	1071	WP_223265709.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
BHS00_RS03720 (BHS00_03695)	purB	768866..770158 (+)	1293	WP_096813720.1	adenylosuccinate lyase	-

Sequence

Protein

• Length: 287 a.a.
• Molecular weight: 32296.21 Da
• Isoelectric Point: 9.0639

>NTDB_id=196540 BHS00_RS03700 WP_188347555.1 764813..765676(+) (dprA) [Lactococcus carnosus strain TMW 2.1612]
MTNFDMYRLKKAGMSNLVLNQFLDFISSVTSDDRQHPMLLFLPKFIRQATMKHKGLFWERFKQLDVKALRQEFLRFPSFS
ILDKAYPEYLREIHNPPVLLFYQGDITLLAHEKLGFVGSRDCSSQGMTSVRKVIRELGNQFVVISGLARGIDTACHLAAI
KNGGRTISVIGTGLDVSYPRENGQLQSFIAKNHLIVTEYGPGEQPLKYHFPDRNRIIAGLSRGVVVTEAKCRSGSLITCE
RAMESGRDVFAIPGNISDGLSDGCHRLIQEGAKLVYQGQDILSEYTY

Nucleotide

• Length: 864 bp

>NTDB_id=196540 BHS00_RS03700 WP_188347555.1 764813..765676(+) (dprA) [Lactococcus carnosus strain TMW 2.1612]
ATGACTAATTTTGATATGTATCGTTTAAAAAAAGCAGGGATGAGTAATTTAGTGCTAAATCAGTTTTTAGACTTTATCAG
CAGTGTCACGTCAGATGATAGGCAGCATCCGATGCTTTTATTTTTACCAAAATTTATCCGACAAGCTACTATGAAACATA
AAGGGTTATTTTGGGAAAGGTTCAAGCAGTTAGATGTAAAAGCCTTACGACAAGAATTTTTAAGGTTCCCATCATTTTCT
ATCTTAGACAAGGCCTATCCGGAGTATCTACGAGAGATACATAATCCACCAGTATTACTCTTTTATCAAGGAGACATTAC
CTTATTAGCACATGAAAAACTTGGTTTTGTAGGTAGTCGTGACTGCAGTTCGCAAGGCATGACAAGTGTTCGAAAAGTCA
TTAGAGAATTGGGGAATCAGTTTGTTGTGATTAGTGGTTTAGCTAGGGGGATTGATACTGCCTGTCACCTAGCTGCCATC
AAAAATGGCGGTAGGACGATTTCAGTAATCGGGACTGGTTTGGATGTCTCTTATCCCAGGGAAAACGGTCAGCTTCAGTC
ATTCATCGCCAAAAATCATCTGATCGTCACTGAGTATGGGCCGGGTGAGCAGCCATTAAAATATCATTTTCCAGACAGAA
ATCGGATTATAGCAGGTCTTTCTAGGGGTGTTGTTGTGACCGAGGCTAAATGCCGCTCAGGCAGTTTGATTACCTGTGAG
AGGGCTATGGAGTCAGGACGTGATGTTTTTGCCATACCTGGAAATATTTCTGATGGCTTGTCAGATGGCTGTCATCGGTT
AATTCAAGAAGGTGCTAAGTTGGTCTATCAAGGTCAGGATATTTTATCCGAATACACCTATTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-69)

• DNA recombination-mediator protein A (DNA_processg_A) (81-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	59.582	100	0.596
dprA	Lactococcus lactis subsp. cremoris KW2	59.582	100	0.596
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	57.491	100	0.575
dprA/cilB/dalA	Streptococcus pneumoniae D39	57.491	100	0.575
dprA/cilB/dalA	Streptococcus pneumoniae R6	57.491	100	0.575
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	57.491	100	0.575
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	57.491	100	0.575
dprA/cilB/dalA	Streptococcus mitis SK321	56.794	100	0.568