Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | BHG40_RS00500 | Genome accession | NZ_CP017143 |
| Coordinates | 100919..101239 (+) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. masoucida strain RFAS1 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 95919..106239
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BHG40_RS00475 (BHG40_00440) | trhA | 96543..97179 (-) | 637 | Protein_77 | PAQR family membrane homeostasis protein TrhA | - |
| BHG40_RS00480 (BHG40_00445) | - | 97404..98939 (+) | 1536 | WP_034283547.1 | pyridoxal-dependent decarboxylase | - |
| BHG40_RS00485 (BHG40_00450) | - | 99025..99576 (+) | 552 | WP_005318063.1 | septation protein A | - |
| BHG40_RS00490 (BHG40_00455) | - | 99603..99899 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| BHG40_RS00495 (BHG40_00460) | cysQ | 99981..100751 (-) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| BHG40_RS00500 (BHG40_00465) | comEA | 100919..101239 (+) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| BHG40_RS00505 (BHG40_00470) | galU | 101334..102245 (+) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| BHG40_RS00510 (BHG40_00475) | - | 102459..103857 (+) | 1399 | Protein_84 | peptide MFS transporter | - |
| BHG40_RS00515 (BHG40_00480) | - | 103933..104905 (-) | 973 | Protein_85 | response regulator | - |
| BHG40_RS00520 (BHG40_00485) | - | 105259..105957 (+) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=195979 BHG40_RS00500 WP_005318073.1 100919..101239(+) (comEA) [Aeromonas salmonicida subsp. masoucida strain RFAS1]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=195979 BHG40_RS00500 WP_005318073.1 100919..101239(+) (comEA) [Aeromonas salmonicida subsp. masoucida strain RFAS1]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |