Detailed information NTG0195939

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: BFP66_RS00690
• Genome accession: NZ_CP017142
• Coordinates: 102346..102780 (+)
• Length: 144 a.a.
• NCBI ID: WP_063725150.1
• Uniprot ID: -
• Organism: Streptococcus suis strain GZ0565
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 97346..107780

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BFP66_RS00655 (BFP66_00655)	-	98088..98453 (+)	366	WP_024417409.1	DUF1033 family protein	-
BFP66_RS00660 (BFP66_00660)	-	98488..99438 (-)	951	WP_024417410.1	S66 peptidase family protein	-
BFP66_RS00665 (BFP66_00665)	comYA	99524..100474 (+)	951	WP_024417411.1	competence type IV pilus ATPase ComGA	Machinery gene
BFP66_RS00670 (BFP66_00670)	comYB	100386..101423 (+)	1038	WP_255195823.1	competence type IV pilus assembly protein ComGB	Machinery gene
BFP66_RS00675 (BFP66_00675)	comYC	101425..101706 (+)	282	WP_009909092.1	competence type IV pilus major pilin ComGC	Machinery gene
BFP66_RS00680 (BFP66_00680)	comGD	101687..102094 (+)	408	WP_024387070.1	competence type IV pilus minor pilin ComGD	-
BFP66_RS00685 (BFP66_00685)	comYE	102066..102359 (+)	294	WP_024390433.1	competence type IV pilus minor pilin ComGE	Machinery gene
BFP66_RS00690 (BFP66_00690)	comGF/cglF	102346..102780 (+)	435	WP_063725150.1	competence type IV pilus minor pilin ComGF	Machinery gene
BFP66_RS00695 (BFP66_00695)	comGG	102758..103168 (+)	411	WP_009909099.1	competence type IV pilus minor pilin ComGG	-
BFP66_RS00700 (BFP66_00700)	comYH	103225..104178 (+)	954	WP_024409299.1	class I SAM-dependent methyltransferase	Machinery gene
BFP66_RS00705 (BFP66_00705)	-	104228..105415 (+)	1188	WP_014637319.1	acetate kinase	-
BFP66_RS00710 (BFP66_00710)	-	105730..106281 (+)	552	WP_024417413.1	folate family ECF transporter S component	-
BFP66_RS00715 (BFP66_00715)	-	106337..107593 (+)	1257	WP_024417414.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16420.77 Da
• Isoelectric Point: 6.9834

>NTDB_id=195939 BFP66_RS00690 WP_063725150.1 102346..102780(+) (comGF/cglF) [Streptococcus suis strain GZ0565]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQAELVKVENGKVYVDKDG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQEKQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=195939 BFP66_RS00690 WP_063725150.1 102346..102780(+) (comGF/cglF) [Streptococcus suis strain GZ0565]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATCCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGCCAATTGCGGTCGGAGTGGGACCAGGCTGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTCGATAAGGATGGA
CAAGCATTAGCCTTTGGCAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGTTACCAGCCCATGCT
CTATCAGGTGGATAGCGCAGCCATTTCCCAAGAAAAGCAGCTGGTGCGCATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae Rx1	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae D39	53.901	97.917	0.528
comGF/cglF	Streptococcus pneumoniae R6	53.901	97.917	0.528
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50	100	0.5
comYF	Streptococcus mutans UA159	49.306	100	0.493
comGF/cglF	Streptococcus mitis SK321	51.493	93.056	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	47.518	97.917	0.465