Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   BGL51_RS09905 Genome accession   NZ_CP017064
Coordinates   1862849..1864084 (+) Length   411 a.a.
NCBI ID   WP_095559498.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1857849..1869084
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BGL51_RS09875 (BGL51_09770) - 1858316..1860922 (+) 2607 WP_095559497.1 YfhO family protein -
  BGL51_RS09895 (BGL51_09790) - 1861466..1862149 (-) 684 WP_011226711.1 YoaK family protein -
  BGL51_RS09900 (BGL51_09795) rlmH 1862165..1862644 (-) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BGL51_RS09905 (BGL51_09800) htrA 1862849..1864084 (+) 1236 WP_095559498.1 S1C family serine protease Regulator
  BGL51_RS09910 (BGL51_09805) spo0J 1864150..1864917 (+) 768 WP_002952299.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42869.18 Da        Isoelectric Point: 4.7061

>NTDB_id=195003 BGL51_RS09905 WP_095559498.1 1862849..1864084(+) (htrA) [Streptococcus thermophilus strain ST3]
MKKFNWKKIVAPIAMLIIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTAKTVYTNITDTTKAVKKVQNAVVSVINYQEGS
SSDSLNDLYGRIFGGGDSSDSSQENSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKITTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTITMQNDNGETVPTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISIADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQEYDVITEIDGKKISSKTDIQTNLYSHSIGDTIKVTFYRGKDKKTVDL
KLTKSTEDISD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=195003 BGL51_RS09905 WP_095559498.1 1862849..1864084(+) (htrA) [Streptococcus thermophilus strain ST3]
ATGAAAAAATTTAACTGGAAGAAAATAGTCGCGCCAATTGCAATGCTAATTATTGGCTTACTAGGTGGTTTACTTGGTGC
CTTTATCCTACTAACAGCAGCCGGGGTATCTTTTACCAATACAACAGATACTGGAGTAAAAACGGCTAAGACCGTCTACA
CCAATATAACAGATACAACTAAGGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTATCAAGAAGGTTCA
TCTTCAGATTCTCTAAATGACCTTTATGGCCGTATCTTTGGCGGAGGGGACAGTTCTGATTCTAGCCAAGAAAATTCAAA
AGATTCAGATGGCCTGCAGGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGCAAAGAAGCCTACATCGTAA
CCAATAACCACGTTGTCGATGGGGCTAAAAAACTCGAAATCATGCTTTCGGATGGTTCGAAAATTACTGGTGAACTTGTT
GGTAAAGACACTTACTCTGACCTAGCAGTTGTCAAAGTATCTTCAGATAAAATAACAACTGTTGCAGAATTTGCAGACTC
AAACTCCCTTACTGTTGGTGAAAAAGCAATTGCTATTGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAAG
GAATCGTTTCTAGCCTTAGCCGTACTATAACGATGCAAAACGATAATGGTGAAACTGTACCAACAAACGCTATCCAAACA
GATGCAGCCATTAACCCTGGTAACTCTGGTGGTGCCCTAGTCAATATTGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCTGCAGTCGCTGGTAGTGCTGTTGAAGGTATGGGGTTTGCCATTCCATCAAACGATGTTGTTGAAA
TCATCAATCAATTAGAAAAAGATGGTAAAGTTACACGACCAGCACTAGGGATCTCAATAGCAGATCTTAATAGCCTTTCT
AGCAGCGCAACTTCTAAATTAGATTTACCAGATGAGGTCAAATCCGGTGTTGTTGTCGGTAGTGTTCAGAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAATATGATGTTATCACTGAGATTGATGGTAAGAAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATCGGAGATACTATCAAGGTAACCTTCTATCGTGGTAAAGATAAGAAAACTGTAGATCTT
AAATTAACAAAATCTACAGAAGACATATCTGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.538

98.054

0.603

  htrA Streptococcus gordonii str. Challis substr. CH1

57.282

100

0.574

  htrA Streptococcus mitis NCTC 12261

53.545

99.513

0.533

  htrA Streptococcus pneumoniae TIGR4

53.301

99.513

0.53

  htrA Streptococcus pneumoniae D39

53.301

99.513

0.53

  htrA Streptococcus pneumoniae Rx1

53.301

99.513

0.53

  htrA Streptococcus pneumoniae R6

53.301

99.513

0.53


Multiple sequence alignment