Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | S101267_RS10215 | Genome accession | NZ_CP021505 |
| Coordinates | 1978981..1979343 (+) | Length | 120 a.a. |
| NCBI ID | WP_013352421.1 | Uniprot ID | A0A9P1JH52 |
| Organism | Bacillus amyloliquefaciens strain SRCM101267 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1973981..1984343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101267_RS10185 (S101267_02042) | - | 1974437..1974670 (+) | 234 | WP_003153997.1 | DUF896 domain-containing protein | - |
| S101267_RS10190 (S101267_02043) | recP/tkt | 1974837..1976840 (+) | 2004 | WP_013352417.1 | transketolase | Machinery gene |
| S101267_RS10195 (S101267_02044) | sirA | 1976991..1977437 (+) | 447 | WP_013352418.1 | sporulation inhibitor of replication protein SirA | - |
| S101267_RS10200 (S101267_02045) | - | 1977523..1977741 (+) | 219 | WP_003153994.1 | YneF family protein | - |
| S101267_RS10205 (S101267_02046) | - | 1977814..1977987 (-) | 174 | WP_088030684.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| S101267_RS10210 (S101267_02047) | - | 1978189..1978896 (+) | 708 | WP_088030531.1 | cytochrome c biogenesis protein CcdA | - |
| S101267_RS10215 (S101267_02048) | pilH | 1978981..1979343 (+) | 363 | WP_013352421.1 | response regulator | Machinery gene |
| S101267_RS10220 (S101267_02049) | - | 1979423..1979914 (+) | 492 | WP_088030532.1 | CcdC family protein | - |
| S101267_RS10225 (S101267_02050) | - | 1979942..1980370 (-) | 429 | WP_013352423.1 | DUF2621 domain-containing protein | - |
| S101267_RS10230 (S101267_02051) | - | 1980605..1980976 (-) | 372 | WP_013352424.1 | spore coat protein | - |
| S101267_RS10235 (S101267_02052) | - | 1981070..1981216 (-) | 147 | WP_003153984.1 | small acid-soluble spore protein P | - |
| S101267_RS10240 (S101267_02053) | sspO | 1981246..1981392 (-) | 147 | WP_003153982.1 | acid-soluble spore protein SspO | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13259.62 Da Isoelectric Point: 5.2063
>NTDB_id=193517 S101267_RS10215 WP_013352421.1 1978981..1979343(+) (pilH) [Bacillus amyloliquefaciens strain SRCM101267]
MTRVLVVDDAKFMRVKIREILESANYIVAGEAADGEEALAVYQKIRPDLVTMDITMPVKNGIQALQDILAFDPKAHVIMC
TAMRQQRIVLEAIELGAKDFIVKPFEASKVLEAVGRVTGT
MTRVLVVDDAKFMRVKIREILESANYIVAGEAADGEEALAVYQKIRPDLVTMDITMPVKNGIQALQDILAFDPKAHVIMC
TAMRQQRIVLEAIELGAKDFIVKPFEASKVLEAVGRVTGT
Nucleotide
Download Length: 363 bp
>NTDB_id=193517 S101267_RS10215 WP_013352421.1 1978981..1979343(+) (pilH) [Bacillus amyloliquefaciens strain SRCM101267]
ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAATCAGAGAAATTCTGGAATCGGCGAATTACAT
AGTGGCCGGAGAAGCGGCTGACGGCGAGGAAGCCCTGGCGGTATATCAAAAAATCCGTCCCGACCTGGTGACAATGGATA
TTACCATGCCGGTCAAAAACGGTATACAGGCGCTGCAGGATATTTTAGCTTTTGACCCGAAAGCCCATGTCATCATGTGC
ACGGCCATGCGGCAGCAGCGGATTGTTCTGGAAGCGATTGAATTAGGCGCTAAAGACTTTATCGTTAAACCGTTTGAAGC
TTCTAAAGTGCTGGAGGCAGTAGGCAGGGTGACGGGAACGTAA
ATGACACGAGTTTTAGTTGTAGATGACGCCAAGTTCATGAGGGTGAAAATCAGAGAAATTCTGGAATCGGCGAATTACAT
AGTGGCCGGAGAAGCGGCTGACGGCGAGGAAGCCCTGGCGGTATATCAAAAAATCCGTCCCGACCTGGTGACAATGGATA
TTACCATGCCGGTCAAAAACGGTATACAGGCGCTGCAGGATATTTTAGCTTTTGACCCGAAAGCCCATGTCATCATGTGC
ACGGCCATGCGGCAGCAGCGGATTGTTCTGGAAGCGATTGAATTAGGCGCTAAAGACTTTATCGTTAAACCGTTTGAAGC
TTCTAAAGTGCTGGAGGCAGTAGGCAGGGTGACGGGAACGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.667 |
100 |
0.367 |