Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | BEN76_RS09070 | Genome accession | NZ_CP016896 |
| Coordinates | 1912359..1913510 (+) | Length | 383 a.a. |
| NCBI ID | WP_004945871.1 | Uniprot ID | A0A1P8EIX3 |
| Organism | Acinetobacter soli strain GFJ2 | ||
| Function | mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1907359..1918510
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN76_RS09050 (BEN76_09050) | - | 1908638..1909429 (+) | 792 | WP_076032902.1 | transglutaminase-like domain-containing protein | - |
| BEN76_RS09055 (BEN76_09055) | - | 1909524..1910369 (-) | 846 | WP_076032903.1 | undecaprenyl-diphosphate phosphatase | - |
| BEN76_RS09060 (BEN76_09060) | - | 1910474..1911166 (-) | 693 | WP_076032904.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| BEN76_RS09065 (BEN76_09065) | pilT | 1911292..1912326 (+) | 1035 | WP_004945874.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| BEN76_RS09070 (BEN76_09070) | pilU | 1912359..1913510 (+) | 1152 | WP_004945871.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| BEN76_RS09075 (BEN76_09075) | fur | 1913561..1913998 (-) | 438 | WP_004935475.1 | ferric iron uptake transcriptional regulator | - |
| BEN76_RS09080 (BEN76_09080) | - | 1914110..1914508 (+) | 399 | WP_004935473.1 | outer membrane protein assembly factor BamE | - |
| BEN76_RS09085 (BEN76_09085) | - | 1914564..1914875 (-) | 312 | WP_076032905.1 | RnfH family protein | - |
| BEN76_RS09090 (BEN76_09090) | - | 1914872..1915960 (-) | 1089 | WP_171261662.1 | hypothetical protein | - |
| BEN76_RS09095 (BEN76_09095) | - | 1916100..1916948 (-) | 849 | WP_076032907.1 | class II glutamine amidotransferase | - |
| BEN76_RS09100 (BEN76_09100) | - | 1917049..1917834 (-) | 786 | WP_076032908.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 43248.56 Da Isoelectric Point: 6.5598
>NTDB_id=193517 BEN76_RS09070 WP_004945871.1 1912359..1913510(+) (pilU) [Acinetobacter soli strain GFJ2]
MDFNDLLNLMATHKASDMFITAGVEPSLKINGKITPVSKTKLDGDMIAQLIDSITTQKQRDEYMATHECNFAILNRERTE
RFRVSAFQQRDLPGMVIRRIETKIPTLDQLQLPPILKDLALTKRGIILFSGATGTGKSTSLASMIHHRNLHSSGHIITIE
DPIEFIHAHAGCIVTQREVGIDTDSYEVALKNTLRQAPDVILIGEIRTREVMDYALAFAETGHLVFATLHANNANQTLER
IIHFFEQDRREQVLMDLSLNLKAVISQQLIATPDGQSRRAAVEVMINSPLMSDYIRQGEIYKIKELMARSGELGMQTFDQ
ALFELHEHGQISYADALKHADSPNNLRLQIKLSQEANTAIDQKEKMLEVDRKITFDGQRHDLK
MDFNDLLNLMATHKASDMFITAGVEPSLKINGKITPVSKTKLDGDMIAQLIDSITTQKQRDEYMATHECNFAILNRERTE
RFRVSAFQQRDLPGMVIRRIETKIPTLDQLQLPPILKDLALTKRGIILFSGATGTGKSTSLASMIHHRNLHSSGHIITIE
DPIEFIHAHAGCIVTQREVGIDTDSYEVALKNTLRQAPDVILIGEIRTREVMDYALAFAETGHLVFATLHANNANQTLER
IIHFFEQDRREQVLMDLSLNLKAVISQQLIATPDGQSRRAAVEVMINSPLMSDYIRQGEIYKIKELMARSGELGMQTFDQ
ALFELHEHGQISYADALKHADSPNNLRLQIKLSQEANTAIDQKEKMLEVDRKITFDGQRHDLK
Nucleotide
Download Length: 1152 bp
>NTDB_id=193517 BEN76_RS09070 WP_004945871.1 1912359..1913510(+) (pilU) [Acinetobacter soli strain GFJ2]
ATGGACTTTAATGATTTACTCAATCTAATGGCAACCCACAAAGCCTCCGATATGTTCATTACGGCTGGTGTTGAGCCATC
ATTAAAAATTAATGGCAAAATTACCCCGGTTTCCAAAACCAAATTAGACGGTGACATGATCGCGCAGTTGATTGATTCGA
TCACCACGCAAAAGCAACGCGATGAGTACATGGCAACACATGAATGTAATTTCGCCATTTTAAACCGCGAACGTACTGAG
CGCTTTCGTGTAAGTGCCTTTCAGCAGCGTGATTTACCCGGCATGGTTATCCGCCGCATCGAAACCAAAATCCCAACGCT
AGATCAACTACAGCTACCACCGATTCTCAAGGACTTGGCCTTGACTAAACGCGGTATTATTTTGTTTTCTGGTGCAACAG
GAACAGGAAAATCCACTTCGCTGGCGTCGATGATTCATCACCGTAATCTACACTCAAGCGGTCATATTATTACCATTGAA
GATCCGATTGAATTTATACATGCACATGCTGGCTGTATTGTTACGCAGCGCGAAGTCGGTATTGATACTGATTCCTACGA
AGTGGCTTTAAAAAATACGTTACGCCAAGCACCAGACGTCATTTTGATTGGTGAAATTCGCACACGTGAAGTCATGGATT
ATGCACTGGCATTTGCCGAAACCGGGCATTTAGTCTTTGCAACTTTACATGCCAACAACGCCAATCAGACCTTAGAGCGT
ATCATTCACTTTTTCGAGCAAGATCGGCGTGAGCAGGTGTTGATGGACTTATCACTTAACTTAAAAGCCGTCATCTCTCA
GCAGCTGATTGCTACGCCTGATGGTCAAAGTCGCCGTGCTGCCGTTGAAGTGATGATCAATTCACCTTTGATGTCGGATT
ACATTCGCCAAGGTGAGATTTATAAAATTAAGGAACTGATGGCACGCTCTGGTGAACTGGGAATGCAGACCTTTGATCAG
GCCTTGTTTGAATTACACGAACACGGACAAATCAGTTATGCCGATGCACTCAAACATGCCGACTCACCCAACAATCTGCG
TTTGCAGATCAAACTTTCTCAAGAAGCCAATACCGCAATTGATCAAAAAGAGAAAATGCTTGAAGTCGATCGAAAAATCA
CCTTTGACGGTCAACGTCATGATCTAAAATGA
ATGGACTTTAATGATTTACTCAATCTAATGGCAACCCACAAAGCCTCCGATATGTTCATTACGGCTGGTGTTGAGCCATC
ATTAAAAATTAATGGCAAAATTACCCCGGTTTCCAAAACCAAATTAGACGGTGACATGATCGCGCAGTTGATTGATTCGA
TCACCACGCAAAAGCAACGCGATGAGTACATGGCAACACATGAATGTAATTTCGCCATTTTAAACCGCGAACGTACTGAG
CGCTTTCGTGTAAGTGCCTTTCAGCAGCGTGATTTACCCGGCATGGTTATCCGCCGCATCGAAACCAAAATCCCAACGCT
AGATCAACTACAGCTACCACCGATTCTCAAGGACTTGGCCTTGACTAAACGCGGTATTATTTTGTTTTCTGGTGCAACAG
GAACAGGAAAATCCACTTCGCTGGCGTCGATGATTCATCACCGTAATCTACACTCAAGCGGTCATATTATTACCATTGAA
GATCCGATTGAATTTATACATGCACATGCTGGCTGTATTGTTACGCAGCGCGAAGTCGGTATTGATACTGATTCCTACGA
AGTGGCTTTAAAAAATACGTTACGCCAAGCACCAGACGTCATTTTGATTGGTGAAATTCGCACACGTGAAGTCATGGATT
ATGCACTGGCATTTGCCGAAACCGGGCATTTAGTCTTTGCAACTTTACATGCCAACAACGCCAATCAGACCTTAGAGCGT
ATCATTCACTTTTTCGAGCAAGATCGGCGTGAGCAGGTGTTGATGGACTTATCACTTAACTTAAAAGCCGTCATCTCTCA
GCAGCTGATTGCTACGCCTGATGGTCAAAGTCGCCGTGCTGCCGTTGAAGTGATGATCAATTCACCTTTGATGTCGGATT
ACATTCGCCAAGGTGAGATTTATAAAATTAAGGAACTGATGGCACGCTCTGGTGAACTGGGAATGCAGACCTTTGATCAG
GCCTTGTTTGAATTACACGAACACGGACAAATCAGTTATGCCGATGCACTCAAACATGCCGACTCACCCAACAATCTGCG
TTTGCAGATCAAACTTTCTCAAGAAGCCAATACCGCAATTGATCAAAAAGAGAAAATGCTTGAAGTCGATCGAAAAATCA
CCTTTGACGGTCAACGTCATGATCTAAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Acinetobacter baylyi ADP1 |
85.64 |
100 |
0.856 |
| pilU | Pseudomonas stutzeri DSM 10701 |
66.106 |
93.211 |
0.616 |
| pilU | Vibrio cholerae strain A1552 |
55.84 |
91.645 |
0.512 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
38.889 |
93.995 |
0.366 |