Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F7310_RS00610 | Genome accession | NZ_CP016796 |
| Coordinates | 116109..116600 (+) | Length | 163 a.a. |
| NCBI ID | WP_072711147.1 | Uniprot ID | A0A1L4BQ24 |
| Organism | Francisella uliginis strain TX07-7310 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 111109..121600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7310_RS00575 (F7310_00575) | - | 111489..111845 (-) | 357 | WP_072711140.1 | (2Fe-2S) ferredoxin domain-containing protein | - |
| F7310_RS00580 (F7310_00580) | - | 111932..112858 (+) | 927 | WP_072711141.1 | S49 family peptidase | - |
| F7310_RS00585 (F7310_00585) | - | 112936..113475 (+) | 540 | WP_072711142.1 | OmpH family outer membrane protein | - |
| F7310_RS00590 (F7310_00590) | - | 113605..114027 (+) | 423 | WP_072711143.1 | rhodanese-like domain-containing protein | - |
| F7310_RS00595 (F7310_00595) | secB | 114049..114495 (+) | 447 | WP_072711144.1 | protein-export chaperone SecB | - |
| F7310_RS00600 (F7310_00600) | recA | 114518..115552 (+) | 1035 | WP_072711145.1 | recombinase RecA | Machinery gene |
| F7310_RS00605 (F7310_00605) | - | 115539..115991 (+) | 453 | WP_072711146.1 | regulatory protein RecX | - |
| F7310_RS00610 (F7310_00610) | ssb | 116109..116600 (+) | 492 | WP_072711147.1 | single-stranded DNA-binding protein | Machinery gene |
| F7310_RS00615 (F7310_00615) | - | 116780..117124 (-) | 345 | WP_072711148.1 | hypothetical protein | - |
| F7310_RS10780 | - | 117372..117497 (+) | 126 | WP_257786353.1 | hypothetical protein | - |
| F7310_RS00620 (F7310_00620) | - | 117929..119083 (+) | 1155 | WP_072711149.1 | acetate/propionate family kinase | - |
| F7310_RS00625 (F7310_00625) | pta | 119093..121201 (+) | 2109 | WP_072711150.1 | phosphate acetyltransferase | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18123.81 Da Isoelectric Point: 5.1409
>NTDB_id=192305 F7310_RS00610 WP_072711147.1 116109..116600(+) (ssb) [Francisella uliginis strain TX07-7310]
MAKGTVNKVILLGRLGNDPEVRTTQNGTVVATLSIATNDGMGENITTEWHRVVVFGKTAEIIQRYASKGSQLFIEGRLRT
NKWQDKNGNMQYTTEIVANNFQFVGGGNAQAQGNSNPSYQNNQNFNQQSGGNFNQNQQQQQKQNDMPDFAEINSSNFDDD
IPF
MAKGTVNKVILLGRLGNDPEVRTTQNGTVVATLSIATNDGMGENITTEWHRVVVFGKTAEIIQRYASKGSQLFIEGRLRT
NKWQDKNGNMQYTTEIVANNFQFVGGGNAQAQGNSNPSYQNNQNFNQQSGGNFNQNQQQQQKQNDMPDFAEINSSNFDDD
IPF
Nucleotide
Download Length: 492 bp
>NTDB_id=192305 F7310_RS00610 WP_072711147.1 116109..116600(+) (ssb) [Francisella uliginis strain TX07-7310]
ATGGCCAAAGGAACTGTTAATAAAGTTATCTTACTTGGAAGACTGGGTAATGATCCAGAAGTTAGAACTACTCAAAATGG
TACTGTGGTTGCTACTTTGAGTATCGCAACTAATGATGGTATGGGTGAAAATATAACTACAGAATGGCATCGTGTTGTTG
TGTTTGGTAAAACTGCTGAGATTATCCAAAGATATGCGAGTAAAGGGTCACAGCTTTTTATTGAAGGTAGACTACGTACT
AACAAATGGCAAGATAAAAACGGTAATATGCAGTACACAACTGAGATTGTGGCTAATAATTTCCAATTTGTCGGTGGTGG
TAATGCTCAAGCTCAAGGAAACTCGAACCCTAGTTACCAAAACAATCAAAACTTTAATCAGCAATCAGGTGGCAACTTTA
ATCAGAATCAGCAACAACAGCAGAAACAAAATGATATGCCAGATTTTGCAGAAATTAACTCATCTAACTTTGATGATGAT
ATTCCATTTTAA
ATGGCCAAAGGAACTGTTAATAAAGTTATCTTACTTGGAAGACTGGGTAATGATCCAGAAGTTAGAACTACTCAAAATGG
TACTGTGGTTGCTACTTTGAGTATCGCAACTAATGATGGTATGGGTGAAAATATAACTACAGAATGGCATCGTGTTGTTG
TGTTTGGTAAAACTGCTGAGATTATCCAAAGATATGCGAGTAAAGGGTCACAGCTTTTTATTGAAGGTAGACTACGTACT
AACAAATGGCAAGATAAAAACGGTAATATGCAGTACACAACTGAGATTGTGGCTAATAATTTCCAATTTGTCGGTGGTGG
TAATGCTCAAGCTCAAGGAAACTCGAACCCTAGTTACCAAAACAATCAAAACTTTAATCAGCAATCAGGTGGCAACTTTA
ATCAGAATCAGCAACAACAGCAGAAACAAAATGATATGCCAGATTTTGCAGAAATTAACTCATCTAACTTTGATGATGAT
ATTCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
43.478 |
100 |
0.491 |
| ssb | Vibrio cholerae strain A1552 |
42.697 |
100 |
0.466 |
| ssb | Neisseria meningitidis MC58 |
35.429 |
100 |
0.38 |
| ssb | Neisseria gonorrhoeae MS11 |
35.429 |
100 |
0.38 |