Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | A6L46_RS04570 | Genome accession | NZ_CP016660 |
| Coordinates | 883407..883880 (-) | Length | 157 a.a. |
| NCBI ID | WP_002258540.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain M22804 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 878407..888880
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6L46_RS04550 (A6L46_04550) | dut | 879290..879742 (-) | 453 | WP_002258542.1 | dUTP diphosphatase | - |
| A6L46_RS04555 (A6L46_04555) | - | 879887..880315 (+) | 429 | Protein_830 | AzlC family ABC transporter permease | - |
| A6L46_RS12110 | - | 881196..881947 (+) | 752 | WP_096001759.1 | IS5-like element IS1301 family transposase | - |
| A6L46_RS04570 (A6L46_04570) | pilX | 883407..883880 (-) | 474 | WP_002258540.1 | PilX family type IV pilin | Machinery gene |
| A6L46_RS04575 (A6L46_04575) | pilK | 883885..884481 (-) | 597 | WP_002258539.1 | pilus assembly PilX family protein | Machinery gene |
| A6L46_RS04580 (A6L46_04580) | pilJ | 884460..885401 (-) | 942 | WP_002258538.1 | PilW family protein | Machinery gene |
| A6L46_RS04585 (A6L46_04585) | pilV | 885398..886012 (-) | 615 | WP_002258537.1 | type IV pilus modification protein PilV | Machinery gene |
| A6L46_RS04590 (A6L46_04590) | pilH | 886042..886707 (-) | 666 | WP_065826209.1 | GspH/FimT family pseudopilin | Machinery gene |
| A6L46_RS04595 (A6L46_04595) | dnaB | 887016..888422 (-) | 1407 | WP_002220671.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17449.24 Da Isoelectric Point: 9.8236
>NTDB_id=190683 A6L46_RS04570 WP_002258540.1 883407..883880(-) (pilX) [Neisseria meningitidis strain M22804]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNTVKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAKKYSVSVKFVDKEKSRAYRLVGVPKAGTGYTLSAWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNTVKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAKKYSVSVKFVDKEKSRAYRLVGVPKAGTGYTLSAWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=190683 A6L46_RS04570 WP_002258540.1 883407..883880(-) (pilX) [Neisseria meningitidis strain M22804]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATACTGTCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTAAAGTTTGTCGATAAGGAAAAATCAAGGGCATACAGGTTGGTCGG
CGTTCCGAAGGCGGGGACGGGTTATACTTTGTCGGCATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTGTCCGCGGATGCCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATACTGTCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTAAAGTTTGTCGATAAGGAAAAATCAAGGGCATACAGGTTGGTCGG
CGTTCCGAAGGCGGGGACGGGTTATACTTTGTCGGCATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTGTCCGCGGATGCCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
90.446 |
100 |
0.904 |
| pilL | Neisseria gonorrhoeae MS11 |
89.172 |
100 |
0.892 |