Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   B9L64_RS01945 Genome accession   NZ_CP020915
Coordinates   434255..434872 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain 50-1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 429255..439872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS01915 yndJ 429569..431209 (+) 1641 WP_003231612.1 YndJ family protein -
  B9L64_RS01920 - 431297..431611 (+) 315 WP_003245621.1 hypothetical protein -
  B9L64_RS01925 pghL 431837..432595 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  B9L64_RS01930 - 432622..433071 (-) 450 WP_003245454.1 YndM family protein -
  B9L64_RS01935 fosM 433279..433713 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  B9L64_RS21195 - 433622..433918 (+) 297 WP_223257629.1 hypothetical protein -
  B9L64_RS01945 dinR/lexA 434255..434872 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  B9L64_RS01950 yneA 435022..435339 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  B9L64_RS01955 dinL 435358..436011 (+) 654 WP_003231596.1 recombinase family protein -
  B9L64_RS01960 ynzC 436075..436308 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  B9L64_RS01965 recP/tkt 436477..438480 (+) 2004 WP_003231593.1 transketolase Machinery gene
  B9L64_RS01970 sirA 438633..439079 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  B9L64_RS01975 yneF 439165..439383 (+) 219 WP_003221221.1 YneF family protein -
  B9L64_RS01980 ynzD 439457..439630 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=189751 B9L64_RS01945 WP_003238209.1 434255..434872(-) (dinR/lexA) [Bacillus subtilis strain 50-1]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=189751 B9L64_RS01945 WP_003238209.1 434255..434872(-) (dinR/lexA) [Bacillus subtilis strain 50-1]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment