Detailed information NTG0188200

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: BBB44_RS15185
• Genome accession: NZ_CP016431
• Coordinates: 3221108..3222610 (-)
• Length: 500 a.a.
• NCBI ID: WP_068926635.1
• Uniprot ID: -
• Organism: Bordetella bronchiseptica strain I328
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 3216108..3227610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBB44_RS15160 (BBB44_15160)	-	3216351..3216692 (-)	342	WP_080699790.1	integration host factor subunit alpha	-
BBB44_RS15165 (BBB44_15165)	pheT	3216698..3219115 (-)	2418	WP_033463641.1	phenylalanine--tRNA ligase subunit beta	-
BBB44_RS15170 (BBB44_15170)	pheS	3219128..3220150 (-)	1023	WP_068926633.1	phenylalanine--tRNA ligase subunit alpha	-
BBB44_RS15175 (BBB44_15175)	rplT	3220225..3220584 (-)	360	WP_003812832.1	50S ribosomal protein L20	-
BBB44_RS15180 (BBB44_15180)	rpmI	3220600..3220797 (-)	198	WP_003812834.1	50S ribosomal protein L35	-
BBB44_RS15185 (BBB44_15185)	comM	3221108..3222610 (-)	1503	WP_068926635.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
BBB44_RS15190 (BBB44_15190)	-	3222717..3222983 (-)	267	WP_010931105.1	accessory factor UbiK family protein	-
BBB44_RS15195 (BBB44_15195)	-	3223691..3224029 (+)	339	WP_003812839.1	P-II family nitrogen regulator	-
BBB44_RS15200 (BBB44_15200)	amt	3224055..3225293 (+)	1239	WP_033463633.1	ammonium transporter	-
BBB44_RS15205 (BBB44_15205)	-	3225369..3225971 (-)	603	WP_068926636.1	TetR/AcrR family transcriptional regulator	-
BBB44_RS15210 (BBB44_15210)	-	3226069..3227358 (+)	1290	WP_033463628.1	MFS transporter	-

Sequence

Protein

• Length: 500 a.a.
• Molecular weight: 52030.97 Da
• Isoelectric Point: 8.7766

>NTDB_id=188200 BBB44_RS15185 WP_068926635.1 3221108..3222610(-) (comM) [Bordetella bronchiseptica strain I328]
MTLAVLASRAIAGWQAPAVRVETHLGSGLPAFAIVGLPDVEVRESRERVRAAIQNSGFDFPPGRITVNLSSADLPKASAR
FDLPIALGILLASGQVAASAAQTAALPDSVWAAELSLSGALVPPAAPLALALAVAREQPGATLVLPAGSAAVAAWVPGIR
VLAAHTLGEAAAYLAGHAELAPAERRAWPEAEPGPCLSDVRGQPAARRALEVAAAGGHSLLMCGPPGAGKSMLAQRLPSL
LPPLEQGQALEVAAIAGAVGAPEVLPGQPPFRAPHHSASSAALVGGGARPRPGEISLAHHGVLFLDELPEFERRALESLR
EPLETGKVVISRALHSVEYPAVFQLVAAMNPCPCGWRGHASKACRCTPDQVRRYAARVSGPLVDRIDLWIELPATEPQWL
AEPPGEPSLPVRERVVRCRQRQLARQGCLNARLSGPALDANCGLGAAARALLQQAMRRLGGSARAAHRALRVARTVADLA
GEREIGAAHIAEAVQYRRPV

Nucleotide

• Length: 1503 bp

>NTDB_id=188200 BBB44_RS15185 WP_068926635.1 3221108..3222610(-) (comM) [Bordetella bronchiseptica strain I328]
ATGACCCTGGCCGTATTGGCCAGCCGGGCGATCGCCGGCTGGCAGGCGCCCGCCGTGCGCGTGGAAACCCATCTGGGCAG
CGGCCTGCCCGCTTTTGCCATCGTCGGCCTGCCCGACGTCGAGGTCCGCGAAAGCCGCGAACGGGTGAGGGCGGCGATCC
AGAACAGCGGTTTCGACTTCCCGCCCGGCCGCATTACCGTCAACCTGTCGTCCGCCGACCTGCCCAAGGCCTCGGCGCGC
TTCGATTTGCCCATTGCGCTGGGTATCCTGCTGGCCAGCGGCCAGGTGGCCGCCAGCGCCGCGCAAACGGCGGCGCTGCC
CGACAGCGTGTGGGCGGCCGAGCTATCGCTGTCGGGCGCCCTGGTGCCGCCGGCCGCGCCCTTGGCCCTGGCGCTGGCCG
TCGCGCGCGAACAGCCGGGCGCGACCCTGGTGCTGCCGGCCGGCAGTGCCGCCGTGGCCGCATGGGTGCCGGGCATCCGG
GTGCTGGCCGCGCATACGTTGGGCGAAGCCGCGGCGTACCTGGCCGGACATGCCGAACTGGCGCCGGCCGAGCGCCGCGC
CTGGCCCGAGGCCGAACCCGGTCCGTGCCTGTCCGACGTACGGGGCCAACCGGCTGCCCGGCGCGCTCTGGAAGTGGCGG
CCGCCGGCGGCCACAGCCTCCTGATGTGCGGGCCGCCCGGGGCGGGCAAAAGCATGCTGGCGCAACGCCTGCCAAGCCTG
CTGCCGCCGCTGGAGCAGGGCCAGGCGCTGGAGGTGGCGGCCATCGCGGGCGCCGTCGGGGCGCCCGAGGTCCTGCCCGG
CCAGCCGCCGTTCCGGGCCCCCCATCATTCCGCCTCGTCCGCCGCCCTGGTGGGCGGCGGCGCCAGGCCACGCCCGGGCG
AGATCAGCCTGGCGCATCACGGCGTGCTCTTCCTGGACGAACTGCCCGAGTTCGAGCGCCGCGCGCTGGAGTCCCTGCGC
GAGCCGCTGGAGACCGGCAAGGTCGTCATTTCCCGGGCGCTGCACAGCGTCGAGTATCCCGCCGTATTCCAGTTGGTGGC
GGCCATGAACCCGTGCCCCTGCGGCTGGCGCGGGCATGCGTCGAAGGCGTGCCGGTGCACGCCGGACCAGGTGCGCCGCT
ATGCGGCGCGCGTGTCGGGGCCGCTGGTCGACCGCATCGACCTGTGGATCGAGCTGCCCGCCACCGAGCCGCAGTGGCTG
GCCGAGCCGCCCGGCGAGCCGTCCCTTCCGGTGCGCGAGCGGGTGGTGCGCTGCCGCCAGCGGCAACTGGCTCGCCAGGG
TTGCCTGAACGCCAGGCTGTCCGGCCCCGCGCTCGATGCGAACTGCGGCCTGGGCGCCGCGGCCCGCGCGCTGCTGCAGC
AGGCCATGCGGCGCCTGGGCGGCTCGGCGCGTGCCGCCCATCGCGCGCTCAGAGTGGCGCGCACCGTGGCCGACCTCGCC
GGCGAGCGCGAGATCGGCGCCGCCCATATCGCCGAAGCGGTACAGTACCGGCGTCCGGTCTAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (406-497)

• Subunit ChlI of Mg-chelatase (ChlI) (21-147)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (197-397)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Vibrio cholerae strain A1552	48.509	100	0.488
comM	Vibrio campbellii strain DS40M4	47.913	100	0.482
comM	Haemophilus influenzae Rd KW20	45.776	100	0.466
comM	Legionella pneumophila str. Paris	44.922	100	0.46
comM	Legionella pneumophila strain ERS1305867	44.922	100	0.46
comM	Glaesserella parasuis strain SC1401	45.079	100	0.458
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	42.157	100	0.43