Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | FORC37_RS13940 | Genome accession | NZ_CP016321 |
| Coordinates | 2841276..2841866 (-) | Length | 196 a.a. |
| NCBI ID | WP_011079354.1 | Uniprot ID | A0A3Q0L3M6 |
| Organism | Vibrio vulnificus strain FORC_037 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2836276..2846866
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC37_RS13920 (FORC37_2516) | aroB | 2837132..2838223 (-) | 1092 | WP_088428126.1 | 3-dehydroquinate synthase | - |
| FORC37_RS13925 (FORC37_2517) | aroK | 2838256..2838774 (-) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| FORC37_RS13930 (FORC37_2518) | pilQ | 2838976..2840760 (-) | 1785 | WP_017419660.1 | type IV pilus secretin PilQ | Machinery gene |
| FORC37_RS13935 (FORC37_2519) | pilP | 2840774..2841286 (-) | 513 | WP_038940290.1 | pilus assembly protein PilP | Machinery gene |
| FORC37_RS13940 (FORC37_2520) | pilO | 2841276..2841866 (-) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FORC37_RS13945 (FORC37_2521) | pilN | 2841859..2842449 (-) | 591 | WP_038940289.1 | PilN domain-containing protein | Machinery gene |
| FORC37_RS13950 (FORC37_2522) | pilM | 2842439..2843446 (-) | 1008 | WP_017419656.1 | type IV pilus assembly protein PilM | Machinery gene |
| FORC37_RS13955 (FORC37_2523) | - | 2843586..2846099 (+) | 2514 | WP_045629545.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22749.25 Da Isoelectric Point: 5.0836
>NTDB_id=186896 FORC37_RS13940 WP_011079354.1 2841276..2841866(-) (pilO) [Vibrio vulnificus strain FORC_037]
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
Nucleotide
Download Length: 591 bp
>NTDB_id=186896 FORC37_RS13940 WP_011079354.1 2841276..2841866(-) (pilO) [Vibrio vulnificus strain FORC_037]
ATGGCTAGTTGGCAAGATCTCGATATTGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAAGAGTTGGCGACGATGCTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
ATGGCTAGTTGGCAAGATCTCGATATTGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGCTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCGGCATTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAAGAGTTGGCGACGATGCTAGCTTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATTGATTGGGGGGAGAAGCAAACCAAGGATTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCTCGCCTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
73.016 |
96.429 |
0.704 |
| pilO | Vibrio cholerae strain A1552 |
67.347 |
100 |
0.673 |