Detailed information NTG0186787

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: A0O31_RS06015
• Genome accession: NZ_CP016312
• Coordinates: 1147795..1150071 (-)
• Length: 758 a.a.
• NCBI ID: WP_071677086.1
• Uniprot ID: -
• Organism: Thermus brockianus strain GE-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1142795..1155071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A0O31_RS05985 (A0O31_01231)	-	1142865..1143230 (+)	366	WP_071677080.1	DUF4870 domain-containing protein	-
A0O31_RS05990 (A0O31_01232)	-	1143208..1143585 (-)	378	WP_071677081.1	4'-phosphopantetheinyl transferase superfamily protein	-
A0O31_RS05995 (A0O31_01233)	rsmF	1143639..1145006 (+)	1368	WP_071677082.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
A0O31_RS06000 (A0O31_01234)	-	1144995..1146041 (-)	1047	WP_071677083.1	3-dehydroquinate synthase	-
A0O31_RS06005 (A0O31_01235)	-	1146019..1146573 (-)	555	WP_071677084.1	shikimate kinase	-
A0O31_RS06010 (A0O31_01236)	aroC	1146590..1147741 (-)	1152	WP_071677085.1	chorismate synthase	-
A0O31_RS06015 (A0O31_01237)	pilQ	1147795..1150071 (-)	2277	WP_071677086.1	secretin N-terminal domain-containing protein	Machinery gene
A0O31_RS06020 (A0O31_01238)	pilW	1150083..1151027 (-)	945	WP_071677087.1	competence protein	Machinery gene
A0O31_RS06025 (A0O31_01239)	pilO	1151024..1151623 (-)	600	WP_071677935.1	type 4a pilus biogenesis protein PilO	Machinery gene
A0O31_RS06030 (A0O31_01240)	pilN	1151613..1152236 (-)	624	WP_071677088.1	flagellar protein FliT	Machinery gene
A0O31_RS06035 (A0O31_01241)	pilM	1152229..1153362 (-)	1134	WP_071677089.1	type IV pilus assembly protein PilM	Machinery gene
A0O31_RS06040 (A0O31_01242)	-	1153555..1154559 (-)	1005	WP_071677090.1	homoisocitrate dehydrogenase	-

Sequence

Protein

• Length: 758 a.a.
• Molecular weight: 82716.92 Da
• Isoelectric Point: 6.0319

>NTDB_id=186787 A0O31_RS06015 WP_071677086.1 1147795..1150071(-) (pilQ) [Thermus brockianus strain GE-1]
MKPLVWVLIWALGSLSLFALAGSLPDEPRFAARVDLKVSESQVRAGATLPLDVVLEALAKSVGLQPLIYRAYDASGDPAK
AQPPLPNVKLDFQGKPFREVWDLLFATYGAQFNLDYLFLPPDVVVVAPTQVITALVDAPSRAGAAERRPYVVGIPEAAYR
QAIQSQGGQVQVVSNVESAKAWVQNDLLPFLSREAAGLNVNWIVVEEAGRLKAILSVLATPEQHARFSDILQRAGIDFRP
LPALAQPKPRLERAYALTHTTFPELLAFLQAQVPGAQISVVPTDPKKALVLATEEDHARLAELLKAADVPKPPAKVRRVY
ALQNLTFLEAQERLKPLLEKELPTARLESIPSNPKALLLEASEADQALFAELLKAVDVPPQAPAPTQEATQRRLYPLRFA
DAEKVAPFLAREVPGIVVQTVPGQPVLSVRGTERQLAEVETLLAQIDRAPEQGPPLFQRAYQLSNAKASELAKVLQEALQ
AQSQAQGQGQGQTPTRRPATVVADERTNTLIVTGTQEDLALVEGLIPRLDQSVPQVNLRVRIQEVQSNLSRSLGIRWNTI
SGGNVVASILSSGLSLIFDSTRSLASLNIIATLDALQKQGLSRALRDVNQLVLNNQTARLQSGETFFIRRVVNDREERVP
FDIGIIVEATPQITADGQILLNIKAEVSGNVQRNPVNGDVDRFTKQVVTTTLRVRDGQTVVLGGLTSQETNQTQQGVPFL
MDIPLIGELFKQRSQDTTEKELLVVITANIVRETANRP

Nucleotide

• Length: 2277 bp

>NTDB_id=186787 A0O31_RS06015 WP_071677086.1 1147795..1150071(-) (pilQ) [Thermus brockianus strain GE-1]
ATGAAGCCCTTGGTTTGGGTCTTGATTTGGGCCTTGGGAAGCTTGAGCCTTTTTGCCCTGGCGGGGAGCCTTCCGGACGA
GCCCCGCTTCGCCGCCAGGGTGGACCTAAAGGTTTCGGAGAGCCAGGTGCGGGCCGGGGCCACCTTGCCCCTGGACGTGG
TCCTGGAAGCCCTGGCCAAAAGCGTGGGCCTTCAGCCCCTCATCTACCGGGCCTACGACGCCTCCGGGGACCCGGCCAAG
GCCCAGCCCCCCTTGCCCAACGTGAAACTGGACTTCCAGGGCAAACCCTTCCGGGAGGTGTGGGACCTCCTCTTCGCCAC
CTACGGGGCCCAGTTCAACCTGGACTACCTCTTCCTGCCCCCGGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCACCG
CCTTGGTGGACGCCCCAAGCCGCGCCGGGGCGGCGGAGCGCAGGCCTTATGTGGTGGGGATTCCCGAGGCTGCCTATCGC
CAAGCCATCCAAAGCCAGGGGGGACAAGTCCAGGTGGTGTCCAATGTGGAATCCGCCAAAGCCTGGGTCCAAAACGACCT
CCTTCCCTTCCTCTCCCGGGAGGCCGCCGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGCCGGGCGTCTCAAGGCCA
TCCTCTCCGTCCTGGCCACCCCCGAGCAACACGCCCGCTTCTCCGATATCCTCCAACGGGCGGGGATTGACTTCCGGCCC
CTTCCCGCCCTGGCCCAGCCCAAGCCCCGCCTGGAGCGGGCCTACGCCCTAACCCACACTACCTTCCCCGAGCTCCTCGC
CTTCCTCCAGGCCCAGGTGCCCGGGGCCCAGATCAGCGTGGTGCCCACGGACCCCAAAAAGGCCCTTGTCCTGGCCACGG
AGGAGGACCACGCCCGCCTGGCCGAGCTCCTCAAGGCCGCCGATGTCCCCAAACCCCCGGCCAAGGTGCGCCGGGTCTAC
GCCCTACAAAACCTCACCTTCCTCGAGGCCCAGGAGCGCCTAAAGCCCCTTCTGGAAAAGGAACTTCCCACGGCCCGCCT
GGAAAGCATCCCCAGCAACCCCAAAGCCCTACTCCTGGAGGCCAGTGAGGCCGACCAGGCCCTCTTCGCCGAGCTCCTAA
AGGCGGTGGACGTGCCCCCGCAGGCCCCCGCCCCCACCCAGGAGGCCACGCAAAGGCGCCTTTACCCCTTGCGCTTCGCC
GACGCCGAGAAGGTGGCCCCCTTCCTGGCCCGGGAGGTGCCAGGCATCGTGGTGCAGACCGTGCCGGGGCAACCCGTCCT
CTCCGTGCGGGGCACGGAGAGGCAACTGGCCGAGGTGGAAACCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAGGGCC
CTCCCCTCTTCCAACGGGCTTACCAGCTCTCCAACGCCAAGGCCAGCGAGCTCGCCAAGGTCCTCCAAGAGGCCCTCCAG
GCCCAAAGCCAGGCCCAGGGCCAGGGGCAGGGGCAAACCCCCACCCGGCGCCCGGCCACGGTGGTGGCGGACGAGCGCAC
CAACACCCTCATCGTCACCGGGACCCAGGAGGATCTGGCCCTAGTGGAGGGGCTCATCCCCCGGCTGGACCAGTCGGTGC
CCCAGGTGAACCTGAGGGTGCGCATCCAAGAGGTGCAGTCCAACCTGAGCCGTAGCCTGGGAATCCGATGGAACACCATC
TCCGGCGGCAACGTGGTAGCGAGCATCCTGAGCTCTGGCCTGTCGTTGATCTTTGACAGCACCCGCAGCCTCGCCAGCCT
GAACATCATAGCGACCCTAGATGCTCTACAAAAACAAGGCCTGTCCCGTGCCCTCAGGGATGTAAACCAGCTCGTGTTGA
ACAACCAAACGGCACGGTTGCAATCGGGCGAAACCTTCTTCATCCGCCGTGTGGTGAACGATCGGGAGGAACGGGTTCCC
TTTGACATCGGCATCATCGTGGAGGCCACTCCCCAGATCACCGCCGACGGGCAGATTCTCCTGAACATCAAGGCCGAGGT
TTCCGGCAACGTCCAGCGCAACCCCGTGAACGGGGATGTGGACCGGTTTACCAAGCAGGTGGTGACCACCACCCTGCGGG
TGCGGGACGGGCAGACCGTGGTCCTAGGGGGGCTTACCTCCCAGGAAACCAACCAGACGCAACAGGGTGTGCCCTTCCTC
ATGGATATTCCCCTTATCGGCGAACTCTTCAAACAGCGTAGCCAGGACACCACGGAGAAGGAACTCCTGGTGGTCATAAC
CGCCAATATCGTAAGGGAGACCGCCAACCGTCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (393-452)

• Bacterial type II/III secretion system short domain (Secretin_N) (459-535)

• Bacterial type II and III secretion system protein (Secretin) (595-752)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	81.009	99.34	0.805