Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A0O31_RS06030 | Genome accession | NZ_CP016312 |
| Coordinates | 1151613..1152236 (-) | Length | 207 a.a. |
| NCBI ID | WP_071677088.1 | Uniprot ID | A0A1J0LSP2 |
| Organism | Thermus brockianus strain GE-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1146613..1157236
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A0O31_RS06015 (A0O31_01237) | pilQ | 1147795..1150071 (-) | 2277 | WP_071677086.1 | secretin N-terminal domain-containing protein | Machinery gene |
| A0O31_RS06020 (A0O31_01238) | pilW | 1150083..1151027 (-) | 945 | WP_071677087.1 | competence protein | Machinery gene |
| A0O31_RS06025 (A0O31_01239) | pilO | 1151024..1151623 (-) | 600 | WP_071677935.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| A0O31_RS06030 (A0O31_01240) | pilN | 1151613..1152236 (-) | 624 | WP_071677088.1 | flagellar protein FliT | Machinery gene |
| A0O31_RS06035 (A0O31_01241) | pilM | 1152229..1153362 (-) | 1134 | WP_071677089.1 | type IV pilus assembly protein PilM | Machinery gene |
| A0O31_RS06040 (A0O31_01242) | - | 1153555..1154559 (-) | 1005 | WP_071677090.1 | homoisocitrate dehydrogenase | - |
| A0O31_RS06045 (A0O31_01243) | - | 1154629..1155138 (-) | 510 | WP_071677091.1 | DUF5317 domain-containing protein | - |
| A0O31_RS06050 (A0O31_01244) | - | 1155174..1156547 (-) | 1374 | WP_420855815.1 | HD-GYP domain-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23388.85 Da Isoelectric Point: 10.2940
>NTDB_id=186790 A0O31_RS06030 WP_071677088.1 1151613..1152236(-) (pilN) [Thermus brockianus strain GE-1]
MIRLNLLPKNLRRRVEPGWWRLVAALFALVVFLVLGFLHYTAYTELSLAKEERDALRAEVEALRPFIQEQNRLQQERKAL
EALLAIREGLRKNFVPWSEYLATFINQIPREGGRFPVALRSVGTRALTEEEAAQQAQNGAFDGKKVRVEFTLQGEALNQG
ALVRFIQAFEASPRFGIEFQGASLDQNRGLYTFSARVGVVGGEQGAR
MIRLNLLPKNLRRRVEPGWWRLVAALFALVVFLVLGFLHYTAYTELSLAKEERDALRAEVEALRPFIQEQNRLQQERKAL
EALLAIREGLRKNFVPWSEYLATFINQIPREGGRFPVALRSVGTRALTEEEAAQQAQNGAFDGKKVRVEFTLQGEALNQG
ALVRFIQAFEASPRFGIEFQGASLDQNRGLYTFSARVGVVGGEQGAR
Nucleotide
Download Length: 624 bp
>NTDB_id=186790 A0O31_RS06030 WP_071677088.1 1151613..1152236(-) (pilN) [Thermus brockianus strain GE-1]
TTGATTAGGCTAAACCTCCTGCCCAAGAACCTGCGCCGTCGGGTGGAACCCGGCTGGTGGCGGCTGGTGGCGGCCCTCTT
CGCCCTGGTGGTCTTCCTGGTCTTGGGCTTCCTCCACTACACCGCCTACACCGAGCTTTCCTTGGCCAAGGAGGAGCGGG
ACGCCCTTAGGGCCGAGGTGGAGGCGTTAAGGCCCTTCATCCAGGAGCAAAACCGCCTGCAACAAGAAAGGAAGGCCCTC
GAGGCCCTGCTCGCCATCCGCGAGGGCCTGCGCAAGAACTTCGTCCCCTGGTCCGAGTACCTGGCCACCTTCATCAACCA
GATCCCCCGGGAAGGGGGGCGCTTCCCCGTGGCGCTCCGCTCCGTGGGTACCCGGGCCCTCACGGAAGAGGAAGCGGCCC
AGCAGGCGCAAAACGGGGCCTTTGACGGCAAGAAGGTGCGGGTGGAGTTCACCCTTCAGGGGGAGGCCCTGAACCAGGGG
GCTTTGGTGCGCTTCATCCAGGCCTTTGAAGCCTCGCCCCGCTTCGGCATAGAGTTCCAGGGGGCATCCTTGGACCAGAA
CCGGGGGCTTTACACCTTCAGCGCCCGGGTGGGCGTAGTGGGGGGTGAGCAAGGTGCTCGCTAG
TTGATTAGGCTAAACCTCCTGCCCAAGAACCTGCGCCGTCGGGTGGAACCCGGCTGGTGGCGGCTGGTGGCGGCCCTCTT
CGCCCTGGTGGTCTTCCTGGTCTTGGGCTTCCTCCACTACACCGCCTACACCGAGCTTTCCTTGGCCAAGGAGGAGCGGG
ACGCCCTTAGGGCCGAGGTGGAGGCGTTAAGGCCCTTCATCCAGGAGCAAAACCGCCTGCAACAAGAAAGGAAGGCCCTC
GAGGCCCTGCTCGCCATCCGCGAGGGCCTGCGCAAGAACTTCGTCCCCTGGTCCGAGTACCTGGCCACCTTCATCAACCA
GATCCCCCGGGAAGGGGGGCGCTTCCCCGTGGCGCTCCGCTCCGTGGGTACCCGGGCCCTCACGGAAGAGGAAGCGGCCC
AGCAGGCGCAAAACGGGGCCTTTGACGGCAAGAAGGTGCGGGTGGAGTTCACCCTTCAGGGGGAGGCCCTGAACCAGGGG
GCTTTGGTGCGCTTCATCCAGGCCTTTGAAGCCTCGCCCCGCTTCGGCATAGAGTTCCAGGGGGCATCCTTGGACCAGAA
CCGGGGGCTTTACACCTTCAGCGCCCGGGTGGGCGTAGTGGGGGGTGAGCAAGGTGCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
80.193 |
100 |
0.802 |