Detailed information
Overview
| Name | comM | Type | Machinery gene |
| Locus tag | BA177_RS00910 | Genome accession | NZ_CP016268 |
| Coordinates | 201465..202976 (+) | Length | 503 a.a. |
| NCBI ID | WP_068611914.1 | Uniprot ID | A0A193LBR4 |
| Organism | Woeseia oceani strain XK5 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 196465..207976
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BA177_RS00880 (BA177_00880) | - | 196553..197611 (-) | 1059 | WP_197493251.1 | sensor histidine kinase | - |
| BA177_RS00885 (BA177_00885) | - | 197676..198158 (-) | 483 | WP_068611908.1 | DUF4124 domain-containing protein | - |
| BA177_RS00890 (BA177_00890) | - | 198499..199710 (-) | 1212 | WP_068618677.1 | ammonium transporter | - |
| BA177_RS00895 (BA177_00895) | - | 199815..200153 (-) | 339 | WP_068611909.1 | P-II family nitrogen regulator | - |
| BA177_RS00900 (BA177_00900) | - | 200209..200829 (-) | 621 | WP_068611911.1 | TorF family putative porin | - |
| BA177_RS00905 (BA177_00905) | - | 201063..201377 (+) | 315 | WP_068611913.1 | accessory factor UbiK family protein | - |
| BA177_RS00910 (BA177_00910) | comM | 201465..202976 (+) | 1512 | WP_068611914.1 | YifB family Mg chelatase-like AAA ATPase | Machinery gene |
| BA177_RS00915 (BA177_00915) | - | 203237..204514 (+) | 1278 | WP_156762624.1 | mechanosensitive ion channel family protein | - |
| BA177_RS00920 (BA177_00920) | - | 204570..205655 (-) | 1086 | WP_068611916.1 | NAD-dependent epimerase/dehydratase family protein | - |
| BA177_RS00925 (BA177_00925) | - | 205942..206892 (-) | 951 | WP_068611918.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 503 a.a. Molecular weight: 52973.50 Da Isoelectric Point: 6.9880
>NTDB_id=186410 BA177_RS00910 WP_068611914.1 201465..202976(+) (comM) [Woeseia oceani strain XK5]
MGLALLNSRAQLGVDAPRVTIEVFLSGGLPTFAIVGMPETAVRESKDRVRGAILSSGYHFPQERIIVSLGPADMCKTGGR
FDLAIALGILAASNQINDELMTSHEFFGELSLNGELRRVPGVLPAALRAAEAGQRIVVPGGNAVEAAFASSEVLGAGSLL
EVTAHLSGSRPLTPEPRRSLQAQEPETLDLKDVRGQVQAKRALEIAAAGGHNLLFIGPPGTGKSMLAKRLPGLLPPMSDA
QALATAAVASVLGVATDVQHWCRRPFRAPHHTASAAALVGGGGDPRPGEVSRAHNGVLFLDELPEFHRNVLEVLREPLES
GYITISRAGTQADFPANFQLVAAMNPCPCGYLGDPRGNCNCSADRVQNYRARISGPLLDRIDIQMKVQRPPASCMRADSP
AGESTAEVAARVLAARERQLQRAGLCNADLDGARLAAACNLTDDASALLERAMDQYGLSPRGHQRMQRVALTITDLAGND
GVGVNAIAEALSLRGLEARAVPV
MGLALLNSRAQLGVDAPRVTIEVFLSGGLPTFAIVGMPETAVRESKDRVRGAILSSGYHFPQERIIVSLGPADMCKTGGR
FDLAIALGILAASNQINDELMTSHEFFGELSLNGELRRVPGVLPAALRAAEAGQRIVVPGGNAVEAAFASSEVLGAGSLL
EVTAHLSGSRPLTPEPRRSLQAQEPETLDLKDVRGQVQAKRALEIAAAGGHNLLFIGPPGTGKSMLAKRLPGLLPPMSDA
QALATAAVASVLGVATDVQHWCRRPFRAPHHTASAAALVGGGGDPRPGEVSRAHNGVLFLDELPEFHRNVLEVLREPLES
GYITISRAGTQADFPANFQLVAAMNPCPCGYLGDPRGNCNCSADRVQNYRARISGPLLDRIDIQMKVQRPPASCMRADSP
AGESTAEVAARVLAARERQLQRAGLCNADLDGARLAAACNLTDDASALLERAMDQYGLSPRGHQRMQRVALTITDLAGND
GVGVNAIAEALSLRGLEARAVPV
Nucleotide
Download Length: 1512 bp
>NTDB_id=186410 BA177_RS00910 WP_068611914.1 201465..202976(+) (comM) [Woeseia oceani strain XK5]
ATGGGCCTGGCGCTCCTGAATAGTCGCGCGCAACTCGGGGTCGATGCGCCGCGGGTCACCATCGAAGTGTTCTTGTCCGG
CGGACTGCCGACGTTTGCCATCGTCGGCATGCCTGAAACCGCGGTACGCGAAAGCAAGGACCGGGTGCGCGGCGCCATTC
TCAGCTCCGGCTATCACTTTCCGCAGGAACGCATCATCGTCAGTCTCGGTCCCGCCGACATGTGCAAGACGGGTGGGCGC
TTCGATCTTGCCATCGCGCTCGGCATTCTCGCGGCCAGCAACCAGATCAACGATGAACTCATGACCAGCCATGAATTCTT
CGGCGAATTGTCGTTGAACGGTGAGTTGCGTCGTGTTCCCGGCGTTTTGCCGGCCGCCTTGCGCGCCGCTGAAGCGGGGC
AGCGGATCGTTGTGCCTGGTGGCAATGCGGTTGAAGCTGCCTTTGCCTCGTCCGAGGTGTTGGGCGCAGGGTCATTGCTG
GAAGTGACGGCGCATCTGTCCGGTTCGCGCCCTCTGACTCCCGAACCACGTCGCTCGTTGCAGGCACAGGAGCCGGAGAC
GCTCGATCTCAAGGACGTTCGTGGCCAGGTGCAGGCAAAACGAGCGCTGGAGATTGCGGCAGCGGGCGGTCACAACCTGT
TGTTCATTGGACCTCCCGGCACTGGCAAGAGCATGTTGGCAAAACGCCTGCCAGGCCTGTTGCCACCGATGTCGGATGCG
CAGGCGCTGGCAACCGCGGCGGTGGCGTCTGTCCTCGGCGTTGCTACCGACGTGCAGCACTGGTGCCGACGGCCATTTCG
GGCGCCGCACCACACCGCGTCGGCAGCGGCGTTGGTCGGTGGTGGCGGCGACCCGCGTCCCGGAGAAGTATCACGCGCGC
ATAACGGGGTGTTGTTTCTCGACGAACTGCCCGAGTTTCATCGCAACGTGCTGGAAGTGCTGCGCGAGCCGCTGGAATCG
GGGTATATCACCATCTCGCGCGCCGGCACGCAGGCGGATTTCCCGGCCAACTTCCAGCTGGTCGCGGCCATGAACCCCTG
CCCCTGTGGCTATCTCGGCGATCCGCGCGGCAACTGCAATTGCAGCGCGGACCGCGTTCAGAACTACCGCGCGCGAATAT
CGGGGCCACTGCTCGATCGCATCGACATACAAATGAAAGTGCAGCGACCGCCCGCTTCCTGCATGCGAGCCGACAGCCCG
GCTGGCGAGTCGACGGCCGAGGTCGCAGCCCGCGTTTTAGCGGCGCGCGAACGGCAGCTGCAACGCGCCGGCTTGTGTAA
CGCTGATCTGGATGGCGCGCGGCTGGCGGCTGCCTGCAATCTCACCGACGACGCCAGTGCTTTGCTCGAACGCGCGATGG
ACCAGTACGGTCTGTCGCCGCGAGGGCATCAACGCATGCAGCGAGTTGCGCTGACCATCACCGATCTCGCCGGCAACGAC
GGCGTGGGCGTGAACGCGATCGCGGAAGCACTCAGCCTGCGCGGCCTGGAGGCCCGGGCAGTTCCGGTCTAA
ATGGGCCTGGCGCTCCTGAATAGTCGCGCGCAACTCGGGGTCGATGCGCCGCGGGTCACCATCGAAGTGTTCTTGTCCGG
CGGACTGCCGACGTTTGCCATCGTCGGCATGCCTGAAACCGCGGTACGCGAAAGCAAGGACCGGGTGCGCGGCGCCATTC
TCAGCTCCGGCTATCACTTTCCGCAGGAACGCATCATCGTCAGTCTCGGTCCCGCCGACATGTGCAAGACGGGTGGGCGC
TTCGATCTTGCCATCGCGCTCGGCATTCTCGCGGCCAGCAACCAGATCAACGATGAACTCATGACCAGCCATGAATTCTT
CGGCGAATTGTCGTTGAACGGTGAGTTGCGTCGTGTTCCCGGCGTTTTGCCGGCCGCCTTGCGCGCCGCTGAAGCGGGGC
AGCGGATCGTTGTGCCTGGTGGCAATGCGGTTGAAGCTGCCTTTGCCTCGTCCGAGGTGTTGGGCGCAGGGTCATTGCTG
GAAGTGACGGCGCATCTGTCCGGTTCGCGCCCTCTGACTCCCGAACCACGTCGCTCGTTGCAGGCACAGGAGCCGGAGAC
GCTCGATCTCAAGGACGTTCGTGGCCAGGTGCAGGCAAAACGAGCGCTGGAGATTGCGGCAGCGGGCGGTCACAACCTGT
TGTTCATTGGACCTCCCGGCACTGGCAAGAGCATGTTGGCAAAACGCCTGCCAGGCCTGTTGCCACCGATGTCGGATGCG
CAGGCGCTGGCAACCGCGGCGGTGGCGTCTGTCCTCGGCGTTGCTACCGACGTGCAGCACTGGTGCCGACGGCCATTTCG
GGCGCCGCACCACACCGCGTCGGCAGCGGCGTTGGTCGGTGGTGGCGGCGACCCGCGTCCCGGAGAAGTATCACGCGCGC
ATAACGGGGTGTTGTTTCTCGACGAACTGCCCGAGTTTCATCGCAACGTGCTGGAAGTGCTGCGCGAGCCGCTGGAATCG
GGGTATATCACCATCTCGCGCGCCGGCACGCAGGCGGATTTCCCGGCCAACTTCCAGCTGGTCGCGGCCATGAACCCCTG
CCCCTGTGGCTATCTCGGCGATCCGCGCGGCAACTGCAATTGCAGCGCGGACCGCGTTCAGAACTACCGCGCGCGAATAT
CGGGGCCACTGCTCGATCGCATCGACATACAAATGAAAGTGCAGCGACCGCCCGCTTCCTGCATGCGAGCCGACAGCCCG
GCTGGCGAGTCGACGGCCGAGGTCGCAGCCCGCGTTTTAGCGGCGCGCGAACGGCAGCTGCAACGCGCCGGCTTGTGTAA
CGCTGATCTGGATGGCGCGCGGCTGGCGGCTGCCTGCAATCTCACCGACGACGCCAGTGCTTTGCTCGAACGCGCGATGG
ACCAGTACGGTCTGTCGCCGCGAGGGCATCAACGCATGCAGCGAGTTGCGCTGACCATCACCGATCTCGCCGGCAACGAC
GGCGTGGGCGTGAACGCGATCGCGGAAGCACTCAGCCTGCGCGGCCTGGAGGCCCGGGCAGTTCCGGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comM | Vibrio campbellii strain DS40M4 |
51.594 |
99.801 |
0.515 |
| comM | Vibrio cholerae strain A1552 |
52.008 |
99.006 |
0.515 |
| comM | Haemophilus influenzae Rd KW20 |
48.606 |
99.801 |
0.485 |
| comM | Glaesserella parasuis strain SC1401 |
47.913 |
100 |
0.479 |
| comM | Legionella pneumophila str. Paris |
46.894 |
99.205 |
0.465 |
| comM | Legionella pneumophila strain ERS1305867 |
46.894 |
99.205 |
0.465 |
| RA0C_RS07335 | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
43.548 |
98.608 |
0.429 |