Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   A6J43_RS10195 Genome accession   NZ_CP020415
Coordinates   1737695..1737976 (-) Length   93 a.a.
NCBI ID   WP_003696701.1    Uniprot ID   A0A0H4IVZ5
Organism   Neisseria gonorrhoeae strain FDAARGOS_204     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1732695..1742976
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J43_RS10155 (A6J43_10180) - 1732979..1733617 (-) 639 WP_003687414.1 7-carboxy-7-deazaguanine synthase QueE -
  A6J43_RS10160 (A6J43_10185) - 1733614..1733982 (-) 369 WP_003694785.1 DUF1304 domain-containing protein -
  A6J43_RS10170 (A6J43_10190) queD 1734248..1734670 (-) 423 WP_082277628.1 6-carboxytetrahydropterin synthase QueD -
  A6J43_RS10175 (A6J43_10195) - 1734758..1735273 (-) 516 WP_003700895.1 DUF1543 domain-containing protein -
  A6J43_RS10180 (A6J43_10200) queC 1735301..1735960 (-) 660 WP_003692586.1 7-cyano-7-deazaguanine synthase QueC -
  A6J43_RS14605 (A6J43_10205) - 1736164..1736349 (-) 186 Protein_1771 NAD(P)H-quinone oxidoreductase -
  A6J43_RS10190 (A6J43_10210) - 1736448..1737674 (+) 1227 WP_082277630.1 YihY family inner membrane protein -
  A6J43_RS10195 (A6J43_10215) comA 1737695..1737976 (-) 282 WP_003696701.1 ATP-binding cassette domain-containing protein Regulator
  A6J43_RS13470 - 1738055..1738171 (+) 117 Protein_1774 IS5/IS1182 family transposase -
  A6J43_RS10200 (A6J43_10220) - 1738172..1739890 (-) 1719 Protein_1775 peptidase domain-containing ABC transporter -
  A6J43_RS10205 (A6J43_10225) - 1739992..1740207 (-) 216 WP_003687400.1 hypothetical protein -
  A6J43_RS10210 (A6J43_10230) - 1740221..1740568 (-) 348 WP_003687399.1 hypothetical protein -
  A6J43_RS10215 (A6J43_10235) - 1740753..1742027 (-) 1275 WP_082277632.1 HlyD family secretion protein -
  A6J43_RS10220 (A6J43_10240) - 1742088..1742441 (-) 354 WP_003704890.1 hypothetical protein -
  A6J43_RS10225 (A6J43_10245) - 1742434..1742661 (-) 228 WP_003694773.1 hypothetical protein -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10117.78 Da        Isoelectric Point: 6.4598

>NTDB_id=185846 A6J43_RS10195 WP_003696701.1 1737695..1737976(-) (comA) [Neisseria gonorrhoeae strain FDAARGOS_204]
MIREEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDEAASHLDIANEKAVNANLNGLSIIKIMAAHRK
ETVESADRKMSLG

Nucleotide


Download         Length: 282 bp        

>NTDB_id=185846 A6J43_RS10195 WP_003696701.1 1737695..1737976(-) (comA) [Neisseria gonorrhoeae strain FDAARGOS_204]
ATGATTCGCGAAGAAATCTCCGCCATGCCTATGGGCTATGAAACCTTGATCGGCGATATGGGCAGCGCACTGTCAGGCGG
ACAAAAACAACGTATCGTATTGGCGCGGGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGAAGCGGCCAGTCATT
TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATTATAAAAATTATGGCGGCACACAGAAAG
GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(14-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H4IVZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

46.154

97.849

0.452
  comA Streptococcus mitis NCTC 12261

45.055

97.849

0.441
  comA Streptococcus pneumoniae TIGR4

45.055

97.849

0.441
  comA Streptococcus pneumoniae Rx1

45.055

97.849

0.441
  comA Streptococcus pneumoniae R6

45.055

97.849

0.441
  comA Streptococcus pneumoniae D39

45.055

97.849

0.441
  comA/nlmT Streptococcus mutans UA159

47.126

93.548

0.441
  comA Streptococcus gordonii str. Challis substr. CH1

43.956

97.849

0.43