Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   A6J53_RS07455 Genome accession   NZ_CP020401
Coordinates   1261316..1261597 (+) Length   93 a.a.
NCBI ID   WP_002244020.1    Uniprot ID   -
Organism   Neisseria meningitidis strain FDAARGOS_214     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1256316..1266597
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J53_RS07420 (A6J53_07240) - 1257280..1257714 (+) 435 WP_010980984.1 hypothetical protein -
  A6J53_RS07425 (A6J53_14500) - 1257782..1258021 (-) 240 Protein_1183 IS30 family transposase -
  A6J53_RS15305 - 1258050..1258223 (+) 174 WP_153957336.1 hypothetical protein -
  A6J53_RS07430 (A6J53_07255) - 1258226..1259164 (+) 939 WP_080542360.1 immunity 49 family protein -
  A6J53_RS15310 - 1259879..1260082 (+) 204 WP_002261355.1 hypothetical protein -
  A6J53_RS07445 (A6J53_07280) - 1260646..1261104 (+) 459 WP_002214429.1 hypothetical protein -
  A6J53_RS07450 (A6J53_07285) - 1261103..1261237 (+) 135 Protein_1188 IS1595 family transposase -
  A6J53_RS07455 (A6J53_07290) comA 1261316..1261597 (+) 282 WP_002244020.1 ATP-binding cassette domain-containing protein Regulator
  A6J53_RS07460 (A6J53_07295) - 1261618..1262844 (-) 1227 WP_002217875.1 YihY family inner membrane protein -
  A6J53_RS16170 (A6J53_14505) - 1262999..1263185 (+) 187 Protein_1191 NAD(P)H-quinone oxidoreductase -
  A6J53_RS07470 (A6J53_07305) queC 1263389..1264048 (+) 660 WP_002245934.1 7-cyano-7-deazaguanine synthase QueC -
  A6J53_RS07475 (A6J53_07310) - 1264076..1264591 (+) 516 WP_002219716.1 DUF1543 domain-containing protein -
  A6J53_RS07480 (A6J53_07315) queD 1264598..1265020 (+) 423 WP_002219715.1 6-carboxytetrahydropterin synthase QueD -
  A6J53_RS07485 (A6J53_07320) - 1265289..1265660 (+) 372 WP_002217868.1 DUF1304 domain-containing protein -
  A6J53_RS07490 (A6J53_07325) - 1265657..1266295 (+) 639 WP_002217866.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 93 a.a.        Molecular weight: 10128.76 Da        Isoelectric Point: 6.2166

>NTDB_id=185540 A6J53_RS07455 WP_002244020.1 1261316..1261597(+) (comA) [Neisseria meningitidis strain FDAARGOS_214]
MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKILFLDEATSHLDIANEKAVNANLNGLSIIKIMAAHRK
ETVESADRKMSLG

Nucleotide


Download         Length: 282 bp        

>NTDB_id=185540 A6J53_RS07455 WP_002244020.1 1261316..1261597(+) (comA) [Neisseria meningitidis strain FDAARGOS_214]
ATGATTCACGAAGAAATCTCCGCCATGCCTATGGGCTATGAAACCTTAATCGGCGATATGGGCAGCGCACTGTCAGGCGG
ACAAAAACAACGCATCGTATTGGCGCGGGCCTTATATTGCGAACCGAAAATCCTATTTTTAGATGAAGCGACCAGCCATT
TGGATATTGCCAATGAAAAAGCAGTCAATGCAAACTTGAATGGCTTGTCTATCATAAAAATTATGGCGGCACACAGAAAG
GAAACGGTGGAATCAGCAGATAGGAAAATGTCTTTAGGATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(14-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis SK321

46.154

97.849

0.452
  comA Streptococcus mitis NCTC 12261

45.055

97.849

0.441
  comA Streptococcus pneumoniae Rx1

45.055

97.849

0.441
  comA Streptococcus pneumoniae D39

45.055

97.849

0.441
  comA Streptococcus pneumoniae TIGR4

45.055

97.849

0.441
  comA Streptococcus pneumoniae R6

45.055

97.849

0.441
  comA/nlmT Streptococcus mutans UA159

47.126

93.548

0.441
  comA Streptococcus gordonii str. Challis substr. CH1

43.956

97.849

0.43

Multiple sequence alignment