Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | A9P84_RS09970 | Genome accession | NZ_CP016030 |
| Coordinates | 2225400..2225714 (-) | Length | 104 a.a. |
| NCBI ID | WP_011214248.1 | Uniprot ID | A0A3A6V5J7 |
| Organism | Legionella pneumophila strain OLDA | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2220400..2230714
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9P84_RS09945 (A9P84_09940) | - | 2220825..2221325 (-) | 501 | WP_011214243.1 | hypothetical protein | - |
| A9P84_RS09950 (A9P84_09945) | - | 2221817..2222677 (+) | 861 | WP_011214244.1 | polysaccharide deacetylase family protein | - |
| A9P84_RS09955 (A9P84_09950) | - | 2222795..2223991 (-) | 1197 | WP_011214245.1 | murein transglycosylase A | - |
| A9P84_RS09960 (A9P84_09955) | lpp1976 | 2224101..2224658 (-) | 558 | WP_011214246.1 | hypothetical protein | Machinery gene |
| A9P84_RS09965 (A9P84_09960) | lpp1977 | 2224655..2225461 (-) | 807 | WP_011214247.1 | PilW family protein | Machinery gene |
| A9P84_RS09970 (A9P84_09965) | lpp1978 | 2225400..2225714 (-) | 315 | WP_011214248.1 | type IV pilus modification PilV family protein | Machinery gene |
| A9P84_RS09975 (A9P84_09970) | hisC | 2225874..2226983 (+) | 1110 | WP_011214249.1 | histidinol-phosphate transaminase | - |
| A9P84_RS09980 (A9P84_09975) | - | 2227020..2227361 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| A9P84_RS09990 (A9P84_09985) | secF | 2227539..2228456 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| A9P84_RS09995 (A9P84_09990) | secD | 2228469..2230325 (-) | 1857 | WP_011214250.1 | protein translocase subunit SecD | - |
| A9P84_RS10000 (A9P84_09995) | yajC | 2230347..2230682 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12267.42 Da Isoelectric Point: 10.0591
>NTDB_id=185540 A9P84_RS09970 WP_011214248.1 2225400..2225714(-) (lpp1978) [Legionella pneumophila strain OLDA]
MSKHKGFTLMEVLMSLMLMTTVVLMLVDQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
MSKHKGFTLMEVLMSLMLMTTVVLMLVDQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
Nucleotide
Download Length: 315 bp
>NTDB_id=185540 A9P84_RS09970 WP_011214248.1 2225400..2225714(-) (lpp1978) [Legionella pneumophila strain OLDA]
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGATCAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTATGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGATCAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila str. Paris |
100 |
100 |
1 |
| lpp1978 | Legionella pneumophila strain ERS1305867 |
98.077 |
100 |
0.981 |