Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | BZG34_RS05495 | Genome accession | NZ_CP019467 |
| Coordinates | 930502..931464 (-) | Length | 320 a.a. |
| NCBI ID | WP_047921846.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain RIVM0640 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 925502..936464
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BZG34_RS05460 (BZG34_05425) | yaaA | 925542..926321 (-) | 780 | WP_003687925.1 | peroxide stress protein YaaA | - |
| BZG34_RS05465 (BZG34_05430) | dapC | 926477..927664 (-) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| BZG34_RS05470 (BZG34_05435) | dut | 927736..928188 (-) | 453 | WP_003701071.1 | dUTP diphosphatase | - |
| BZG34_RS05475 (BZG34_05440) | - | 928354..929065 (+) | 712 | Protein_953 | AzlC family ABC transporter permease | - |
| BZG34_RS05480 (BZG34_05445) | - | 929062..929370 (+) | 309 | WP_003706588.1 | AzlD family protein | - |
| BZG34_RS05485 (BZG34_05450) | pilL | 929440..929913 (-) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| BZG34_RS05490 (BZG34_05455) | pilK | 929915..930523 (-) | 609 | WP_047921847.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| BZG34_RS05495 (BZG34_05460) | pilJ | 930502..931464 (-) | 963 | WP_047921846.1 | PilW family protein | Machinery gene |
| BZG34_RS05500 (BZG34_05465) | pilV/pilI | 931461..932075 (-) | 615 | WP_012503479.1 | type IV pilus modification protein PilV | Regulator |
| BZG34_RS05505 (BZG34_05470) | pilH | 932107..932769 (-) | 663 | WP_047916986.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| BZG34_RS05510 (BZG34_05475) | dnaB | 933026..934429 (-) | 1404 | WP_012503477.1 | replicative DNA helicase | - |
| BZG34_RS05520 (BZG34_05485) | - | 934593..935174 (+) | 582 | WP_003690895.1 | superoxide dismutase | - |
| BZG34_RS05530 (BZG34_05495) | - | 935406..935915 (-) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35251.96 Da Isoelectric Point: 8.4268
>NTDB_id=180696 BZG34_RS05495 WP_047921846.1 930502..931464(-) (pilJ) [Neisseria gonorrhoeae strain RIVM0640]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESLNIRYQGFTHRPNALIFQYGIDDANASAETTV
VSSCGAISKPGKQIPTLEDAKKELKIQDSDKEQNGNIARQRHVVNAYAVGRFGNNEEGLFRFQLDDKGEWGNPQLLAKKV
KRMDVRYIYVSDCPEDEDAGKEEQFKYTGKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESLNIRYQGFTHRPNALIFQYGIDDANASAETTV
VSSCGAISKPGKQIPTLEDAKKELKIQDSDKEQNGNIARQRHVVNAYAVGRFGNNEEGLFRFQLDDKGEWGNPQLLAKKV
KRMDVRYIYVSDCPEDEDAGKEEQFKYTGKFDSSVTPAGVEVLLDSGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 963 bp
>NTDB_id=180696 BZG34_RS05495 WP_047921846.1 930502..931464(-) (pilJ) [Neisseria gonorrhoeae strain RIVM0640]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTTTAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTCCAATACGGAATCGATGATGCTAATGCAAGCGCCGAGACTACCGTC
GTCAGCAGCTGTGGCGCAATATCGAAACCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCA
GGATTCTGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATAATGAGGAAGGTTTGTTCCGCTTCCAATTGGATGATAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTT
AAACGTATGGATGTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATA
TACGGGTAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCG
CTTCTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTT
TGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTTTAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTCCAATACGGAATCGATGATGCTAATGCAAGCGCCGAGACTACCGTC
GTCAGCAGCTGTGGCGCAATATCGAAACCGGGTAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCA
GGATTCTGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATAATGAGGAAGGTTTGTTCCGCTTCCAATTGGATGATAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGGTT
AAACGTATGGATGTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATA
TACGGGTAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTAGTGATGCCAAGATTGCCG
CTTCTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTT
TGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
87.5 |
100 |
0.875 |