Detailed information NTG0180680

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: A6M16_RS03545
• Genome accession: NZ_CP015557
• Coordinates: 699622..700575 (+)
• Length: 317 a.a.
• NCBI ID: WP_024395874.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DN13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 694622..705575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6M16_RS03530 (A6M16_03535)	-	695471..696508 (-)	1038	WP_024389338.1	3-deoxy-7-phosphoheptulonate synthase	-
A6M16_RS03535 (A6M16_03540)	-	696808..697401 (-)	594	WP_024395872.1	DUF1361 domain-containing protein	-
A6M16_RS03540 (A6M16_03545)	metG	697557..699560 (+)	2004	WP_024395873.1	methionine--tRNA ligase	-
A6M16_RS03545 (A6M16_03550)	coiA	699622..700575 (+)	954	WP_024395874.1	competence protein CoiA	Machinery gene
A6M16_RS03550 (A6M16_03555)	-	700619..700984 (+)	366	WP_014637766.1	type II toxin-antitoxin system RelE/ParE family toxin	-
A6M16_RS03555 (A6M16_03560)	HI0659	700974..701273 (+)	300	WP_014637767.1	helix-turn-helix domain-containing protein	Machinery gene
A6M16_RS03560 (A6M16_03565)	pepF	701383..703185 (+)	1803	WP_024395875.1	oligoendopeptidase F	Regulator
A6M16_RS03565 (A6M16_03570)	-	703187..703630 (+)	444	WP_024395876.1	hypothetical protein	-
A6M16_RS03570 (A6M16_03575)	-	703641..704189 (+)	549	WP_024395877.1	DUF6630 family protein	-
A6M16_RS03575 (A6M16_03580)	-	704264..704983 (+)	720	WP_050573105.1	O-methyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36721.35 Da
• Isoelectric Point: 8.2802

>NTDB_id=180680 A6M16_RS03545 WP_024395874.1 699622..700575(+) (coiA) [Streptococcus suis strain DN13]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLYILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENVLTKTAEEWYPHIRLPRSAIGFAQIQKDLSPVYQDFDQYYAEVKDKRIQAVYPPAVYWKISRIKE

Nucleotide

• Length: 954 bp

>NTDB_id=180680 A6M16_RS03545 WP_024395874.1 699622..700575(+) (coiA) [Streptococcus suis strain DN13]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGACTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCAGCCCAGCATCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGTCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTCCA
ATGTTCCAGTCTGCCCATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGTACATCTTGCGTCTGCCTTTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATGTGCTGACAAAGACGGCAGAAGAATGGTATCCCCACATCCGTCT
GCCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAAGTCCAGTCTATCAGGATTTTGACCAGTATTATGCGG
AGGTCAAGGACAAGCGGATACAAGCGGTTTATCCACCAGCAGTTTATTGGAAAATAAGTAGAATAAAAGAATGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-217)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.226	97.792	0.521
coiA	Streptococcus pneumoniae TIGR4	50.968	97.792	0.498
coiA	Streptococcus pneumoniae Rx1	50.968	97.792	0.498
coiA	Streptococcus pneumoniae D39	50.968	97.792	0.498
coiA	Streptococcus pneumoniae R6	50.968	97.792	0.498
coiA	Lactococcus lactis subsp. cremoris KW2	40.312	100	0.407