Detailed information NTG0178396

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: AWV72_RS07460
• Genome accession: NZ_CP015308
• Coordinates: 1568391..1570541 (-)
• Length: 716 a.a.
• NCBI ID: WP_015825125.1
• Uniprot ID: -
• Organism: Lactiplantibacillus plantarum strain LY-78
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1563391..1575541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AWV72_RS07430	-	1563597..1563800 (-)	204	WP_069137160.1	hypothetical protein	-
AWV72_RS07435 (AWV72_01585)	-	1563938..1564624 (-)	687	WP_069137161.1	CPBP family intramembrane glutamic endopeptidase	-
AWV72_RS07440 (AWV72_01586)	-	1564718..1565398 (-)	681	WP_065080250.1	CPBP family intramembrane glutamic endopeptidase	-
AWV72_RS07445 (AWV72_01587)	-	1565485..1566153 (-)	669	WP_069137162.1	CPBP family intramembrane glutamic endopeptidase	-
AWV72_RS07450 (AWV72_01588)	-	1566220..1566909 (-)	690	WP_069137163.1	CPBP family intramembrane glutamic endopeptidase	-
AWV72_RS07455 (AWV72_01589)	-	1566999..1568375 (-)	1377	WP_069137164.1	HlyD family secretion protein	-
AWV72_RS07460 (AWV72_01590)	comA	1568391..1570541 (-)	2151	WP_015825125.1	peptide cleavage/export ABC transporter	Regulator
AWV72_RS07465 (AWV72_01591)	plnE	1570808..1570978 (+)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
AWV72_RS07470 (AWV72_03083)	plnF	1571003..1571161 (+)	159	WP_003643811.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
AWV72_RS15510	-	1571533..1572033 (+)	501	WP_225351141.1	CPBP family intramembrane glutamic endopeptidase	-
AWV72_RS07480 (AWV72_01593)	-	1572338..1573081 (-)	744	WP_069137165.1	response regulator transcription factor	-
AWV72_RS07485 (AWV72_01594)	-	1573200..1573943 (-)	744	WP_063724134.1	LytTR family transcriptional regulator DNA-binding domain-containing protein	-
AWV72_RS07490 (AWV72_01595)	-	1573944..1575116 (-)	1173	WP_228406337.1	sensor histidine kinase	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79938.63 Da
• Isoelectric Point: 6.6531

>NTDB_id=178396 AWV72_RS07460 WP_015825125.1 1568391..1570541(-) (comA) [Lactiplantibacillus plantarum strain LY-78]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFEVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVGIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVILNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=178396 AWV72_RS07460 WP_015825125.1 1568391..1570541(-) (comA) [Lactiplantibacillus plantarum strain LY-78]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGAGGTACAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTCGTTGTAAAAACCTCGAAAACACATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGACACTTATATTCCCAATAATATGCACAGTACATTGGCAGTGGTGGGCATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCGAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAGAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGGGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAAC
CAAATAGTGGTGATGTCATATTGAATGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAACCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACGGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCACCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAAAAACAATTAATTGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGTTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	58.906	99.581	0.587
comA	Streptococcus pneumoniae Rx1	58.626	99.581	0.584
comA	Streptococcus pneumoniae D39	58.626	99.581	0.584
comA	Streptococcus pneumoniae R6	58.626	99.581	0.584
comA	Streptococcus pneumoniae TIGR4	58.485	99.581	0.582
comA	Streptococcus mitis SK321	58.345	99.581	0.581
comA	Streptococcus gordonii str. Challis substr. CH1	57.103	100	0.573
comA/nlmT	Streptococcus mutans UA159	54.596	100	0.547